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UniProtKB - P53622 (COPA_YEAST)

Protein

Coatomer subunit alpha

Gene

COP1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.1 Publication

Miscellaneous

Present with 15200 molecules/cell in log phase SD medium.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • structural molecule activity Source: InterPro
  • ubiquitin binding Source: SGD
View the complete GO annotation on QuickGO ...

GO - Biological processi

  • endoplasmic reticulum to Golgi vesicle-mediated transport Source: SGD
  • intracellular protein transport Source: GO_Central
  • intra-Golgi vesicle-mediated transport Source: GO_Central
  • retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum Source: SGD
View the complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processER-Golgi transport, Protein transport, Transport

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...BioCyci		YEAST:G3O-29542-MONOMER

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-SCE-6807878 COPI-mediated anterograde transport
R-SCE-6811434 COPI-dependent Golgi-to-ER retrograde traffic

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Coatomer subunit alpha
Alternative name(s):
Alpha-coat protein
Short name:
Alpha-COP
Retrieval from endoplasmic reticulum protein 1
Secretory protein 22
Suppressor of osmo-sensitivity 1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:COP1
Synonyms:RET1, SEC33, SOO1
Ordered Locus Names:YDL145C
ORF Names:D1578
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri559292 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002311 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome IV

Organism-specific databases

Saccharomyces Genome Database

More...SGDi		S000002304 COP1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Cytoplasmic vesicle, Golgi apparatus, Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000509101 – 1201Coatomer subunit alphaAdd BLAST1201

Proteomic databases

MaxQB - The MaxQuant DataBase

More...MaxQBi		P53622

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		P53622

PRoteomics IDEntifications database

More...PRIDEi		P53622

PTM databases

CarbonylDB database of protein carbonylation sites

More...CarbonylDBi		P53622

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		P53622

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Oligomeric complex that consists of at least the alpha, beta, beta', gamma, delta, epsilon and zeta subunits. Interacts with the ESCRT-0 subunit VPS27. Interacts with KEI1 (via C-terminal region).2 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

GO - Molecular functioni

View the complete GO annotation on QuickGO ...

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...BioGridi		31916, 595 interactors

ComplexPortal: manually curated resource of macromolecular complexes

More...ComplexPortali		CPX-1652 COPI vesicle coat complex

Database of interacting proteins

More...DIPi		DIP-2582N

Protein interaction database and analysis system

More...IntActi		P53622, 74 interactors

Molecular INTeraction database

More...MINTi		P53622

STRING: functional protein association networks

More...STRINGi		4932.YDL145C

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

11201
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...PDBei

Protein Data Bank RCSB

More...RCSB PDBi

Protein Data Bank Japan

More...PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3MKQX-ray2.50B/D/F642-818[»]
3MV2X-ray2.90A/C/E900-1201[»]
3MV3X-ray3.25A/C/E900-1201[»]

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...ProteinModelPortali		P53622

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		P53622

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

More...EvolutionaryTracei		P53622

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati9 – 39WD 1Add BLAST31
Repeati51 – 81WD 2Add BLAST31
Repeati93 – 123WD 3Add BLAST31
Repeati135 – 165WD 4Add BLAST31
Repeati207 – 237WD 5Add BLAST31
Repeati251 – 281WD 6Add BLAST31

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

Ensembl GeneTree

More...GeneTreei		ENSGT00940000155451

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000195913

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		P53622

KEGG Orthology (KO)

More...KOi		K05236

Identification of Orthologs from Complete Genome Data

More...OMAi		GNQVFCL

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		2.130.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR016391 Coatomer_asu
IPR010714 Coatomer_asu_C
IPR006692 Coatomer_WD-assoc_reg
IPR020472 G-protein_beta_WD-40_rep
IPR011044 Quino_amine_DH_bsu
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf

Pfam protein domain database

More...Pfami		View protein in Pfam
PF04053 Coatomer_WDAD, 1 hit
PF06957 COPI_C, 1 hit
PF00400 WD40, 5 hits

PIRSF; a whole-protein classification database

More...PIRSFi		PIRSF003354 Coatomer_alpha_subunit, 1 hit

Protein Motif fingerprint database; a protein domain database

More...PRINTSi		PR00320 GPROTEINBRPT

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00320 WD40, 7 hits

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF50969 SSF50969, 1 hit
SSF50978 SSF50978, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS00678 WD_REPEATS_1, 2 hits
PS50082 WD_REPEATS_2, 5 hits
PS50294 WD_REPEATS_REGION, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

P53622-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKMLTKFESK STRAKGIAFH PSRPWVLVAL FSSTIQLWDY RMGTLLHRFE 
        60         70         80         90        100
DHEGPVRGLD FHPTQPIFVS AGDDYTIKVW SLDTNKCLYT LTGHLDYVRT 
       110        120        130        140        150
VFFHRELPWI ISASDDQTIR IWNWQNRKEI ACLTGHNHFV MCAQFHPTDD 
       160        170        180        190        200
LIVSASLDET IRIWDISGLR KRHSAPGTSS FEEQMSAQQN LLDGSLGDCV 
       210        220        230        240        250
VKFILEGHTR GVNWASFHPT LPLIVSGSDD RQVKLWRMSA TKAWEVDTCR 
       260        270        280        290        300
GHTNNVDSVI FHPHQNLIIS VGEDKTLRVW DLDKRTPVKQ FKRENDRFWL 
       310        320        330        340        350
IAAHPHINLF GAAHDSGIMV FKLDRERPCS FIHQNQLFFV NAEKQIQSFN 
       360        370        380        390        400
FQKRVASLPY ASLKGIGQPW DAFRSISYNP SQHSVLVNEA NGKFALVILP 
       410        420        430        440        450
KQPVGAVEPT SVTQDTGNFA TFVGRNRFVV YNKNTESVEV RSLENKVTRN 
       460        470        480        490        500
IKVEETVRTI VAAGPGSVLV IHPREVILYD VQQGKKVSQL AVKNVKYVSW 
       510        520        530        540        550
SLDGQYVALM SKHTITLATK KLELINSMHE TIRIKSAAWD ETGVLIYSTL 
       560        570        580        590        600
NHIRYSLLNG DRGIIKTLEK TLYITKVQGK LVYCLNREGE IEILTIDPTE 
       610        620        630        640        650
YRFKKALVNK NFPEVLRLIK DSNLVGQNII SYLQKSGYPE IALQFVQDPH 
       660        670        680        690        700
IRFDLALEYG NLDVALDEAK KLNDSSTWER LIQEALAQGN ASLAEMIYQT 
       710        720        730        740        750
QHSFDKLSFL YLVTGDVNKL SKMQNIAQTR EDFGSMLLNT FYNNSTKERS 
       760        770        780        790        800
SIFAEGGSLP LAYAVAKANG DEAAASAFLE QAEVDEQDVT LPDQMDASNF 
       810        820        830        840        850
VQRPVISKPL EKWPLKEAEL SYFEKAVLGQ IDDLTIDDET PAVNTTQEQE 
       860        870        880        890        900
EPLGEENFND EDIGEDEGAW DLGDEDLDVG EELPEEVEQG EITSPAQEVE 
       910        920        930        940        950
TAIWIKNSKL PAVLVAAGAF DAAVQALSKQ VGVVKLEPLK KYFTNIYEGC 
       960        970        980        990       1000
RTYIPSTPCE LPAQLGYVRA YDDTVSEDQI LPYVPGLDVV NEKMNEGYKN 
      1010       1020       1030       1040       1050
FKLNKPDIAI ECFREAIYRI TLLMVDDAED EKLAHKILET AREYILGLSI 
      1060       1070       1080       1090       1100
ELERRSLKEG NTVRMLELAA YFTKAKLSPI HRTNALQVAM SQHFKHKNFL 
      1110       1120       1130       1140       1150
QASYFAGEFL KIISSGPRAE QARKIKNKAD SMASDAIPID FDPYAKFDIC 
      1160       1170       1180       1190       1200
AATYKPIYED TPSVSDPLTG SKYVITEKDK IDRIAMISKI GAPASGLRIR 

V
Length:1,201
Mass (Da):135,607
Last modified:November 1, 1997 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD3589073106F5570
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti753F → L in CAA86588 (PubMed:8001155).Curated1
Sequence conflicti753F → L in CAA58712 (PubMed:7724544).Curated1
Sequence conflicti905I → T in CAA86588 (PubMed:8001155).Curated1
Sequence conflicti905I → T in CAA58712 (PubMed:7724544).Curated1
Sequence conflicti1006P → L in CAA86588 (PubMed:8001155).Curated1
Sequence conflicti1006P → L in CAA58712 (PubMed:7724544).Curated1
Sequence conflicti1027 – 1028DA → NT in CAA86588 (PubMed:8001155).Curated2
Sequence conflicti1027 – 1028DA → NT in CAA58712 (PubMed:7724544).Curated2

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
Z46617 Genomic DNA Translation: CAA86588.1
X83754 Genomic DNA Translation: CAA58712.1
Z74193 Genomic DNA Translation: CAA98719.1
Z74192 Genomic DNA Translation: CAA98718.1
X97751 Genomic DNA Translation: CAA66346.1
BK006938 Genomic DNA Translation: DAA11713.1

Protein sequence database of the Protein Information Resource

More...PIRi		S67692 ERBYA

NCBI Reference Sequences

More...RefSeqi		NP_010136.1, NM_001180205.1

Genome annotation databases

Ensembl fungal genome annotation project

More...EnsemblFungii		YDL145C_mRNA; YDL145C_mRNA; YDL145C

Database of genes from NCBI RefSeq genomes

More...GeneIDi		851410

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		sce:YDL145C

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z46617 Genomic DNA Translation: CAA86588.1
X83754 Genomic DNA Translation: CAA58712.1
Z74193 Genomic DNA Translation: CAA98719.1
Z74192 Genomic DNA Translation: CAA98718.1
X97751 Genomic DNA Translation: CAA66346.1
BK006938 Genomic DNA Translation: DAA11713.1
PIRiS67692 ERBYA
RefSeqiNP_010136.1, NM_001180205.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3MKQX-ray2.50B/D/F642-818[»]
3MV2X-ray2.90A/C/E900-1201[»]
3MV3X-ray3.25A/C/E900-1201[»]
ProteinModelPortaliP53622
SMRiP53622
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi31916, 595 interactors
ComplexPortaliCPX-1652 COPI vesicle coat complex
DIPiDIP-2582N
IntActiP53622, 74 interactors
MINTiP53622
STRINGi4932.YDL145C

PTM databases

CarbonylDBiP53622
iPTMnetiP53622

Proteomic databases

MaxQBiP53622
PaxDbiP53622
PRIDEiP53622

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYDL145C_mRNA; YDL145C_mRNA; YDL145C
GeneIDi851410
KEGGisce:YDL145C

Organism-specific databases

SGDiS000002304 COP1

Phylogenomic databases

GeneTreeiENSGT00940000155451
HOGENOMiHOG000195913
InParanoidiP53622
KOiK05236
OMAiGNQVFCL

Enzyme and pathway databases

BioCyciYEAST:G3O-29542-MONOMER
ReactomeiR-SCE-6807878 COPI-mediated anterograde transport
R-SCE-6811434 COPI-dependent Golgi-to-ER retrograde traffic

Miscellaneous databases

EvolutionaryTraceiP53622

Protein Ontology

More...PROi		PR:P53622

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR016391 Coatomer_asu
IPR010714 Coatomer_asu_C
IPR006692 Coatomer_WD-assoc_reg
IPR020472 G-protein_beta_WD-40_rep
IPR011044 Quino_amine_DH_bsu
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF04053 Coatomer_WDAD, 1 hit
PF06957 COPI_C, 1 hit
PF00400 WD40, 5 hits
PIRSFiPIRSF003354 Coatomer_alpha_subunit, 1 hit
PRINTSiPR00320 GPROTEINBRPT
SMARTiView protein in SMART
SM00320 WD40, 7 hits
SUPFAMiSSF50969 SSF50969, 1 hit
SSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 2 hits
PS50082 WD_REPEATS_2, 5 hits
PS50294 WD_REPEATS_REGION, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCOPA_YEAST
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P53622
Secondary accession number(s): D6VRK3, Q07595
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: November 1, 1997
Last modified: January 16, 2019
This is version 183 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome IV
    Yeast (Saccharomyces cerevisiae) chromosome IV: entries and gene names
  3. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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