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Protein

40S ribosomal protein S25

Gene

rps-25

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-CEL-72702 Ribosomal scanning and start codon recognition
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S25
Gene namesi
Name:rps-25
ORF Names:K02B2.5
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiK02B2.5 ; CE04691 ; WBGene00004494 ; rps-25

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001928761 – 11740S ribosomal protein S25Add BLAST117

Proteomic databases

EPDiP52821
PaxDbiP52821
PeptideAtlasiP52821
PRIDEiP52821

Expressioni

Gene expression databases

BgeeiWBGene00004494

Interactioni

Protein-protein interaction databases

IntActiP52821, 1 interactor
STRINGi6239.K02B2.5.2

Structurei

3D structure databases

ProteinModelPortaliP52821
SMRiP52821
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1767 Eukaryota
COG4901 LUCA
GeneTreeiENSGT00390000004856
HOGENOMiHOG000203673
InParanoidiP52821
KOiK02975
OMAiKEVPTFR
OrthoDBiEOG091G134K
PhylomeDBiP52821

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR004977 Ribosomal_S25
IPR036388 WH-like_DNA-bd_sf
PANTHERiPTHR12850 PTHR12850, 1 hit
PfamiView protein in Pfam
PF03297 Ribosomal_S25, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD012268 Ribosomal_S25, 1 hit

Sequencei

Sequence statusi: Complete.

P52821-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPPKKDPKGG KAPPSKKKEG SGGGKAKKKK WSKGKVRDKL NNMVLFDQAT
60 70 80 90 100
YDKLYKEVIT YKLITPSVVS ERLKVRASLA KAGLKELQAK GLVKCVVHHH
110
GQVVYTRATK EADVIVE
Length:117
Mass (Da):12,912
Last modified:October 1, 1996 - v1
Checksum:iDEC7FC7A0E4EA66D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080181 Genomic DNA Translation: CCD61804.1
PIRiE88700
RefSeqiNP_500895.1, NM_068494.5
UniGeneiCel.8400

Genome annotation databases

EnsemblMetazoaiK02B2.5.1; K02B2.5.1; WBGene00004494
K02B2.5.2; K02B2.5.2; WBGene00004494
GeneIDi177365
KEGGicel:CELE_K02B2.5
UCSCiK02B2.5.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiRS25_CAEEL
AccessioniPrimary (citable) accession number: P52821
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: October 1, 1996
Last modified: February 28, 2018
This is version 100 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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