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Protein

UPF0235 protein YggU

Gene

yggU

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7529-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0235 protein YggUUniRule annotation
Gene namesi
Name:yggUUniRule annotation
Ordered Locus Names:b2953, JW5479
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12981 yggU

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001394411 – 96UPF0235 protein YggUAdd BLAST96

Proteomic databases

PaxDbiP52060
PRIDEiP52060

Interactioni

Protein-protein interaction databases

BioGridi4259417, 167 interactors
IntActiP52060, 3 interactors
STRINGi316385.ECDH10B_3128

Structurei

3D structure databases

ProteinModelPortaliP52060
SMRiP52060
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0235 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105VZ9 Bacteria
COG1872 LUCA
HOGENOMiHOG000019208
InParanoidiP52060
KOiK09131
PhylomeDBiP52060

Family and domain databases

Gene3Di3.30.1200.10, 1 hit
HAMAPiMF_00634 UPF0235, 1 hit
InterProiView protein in InterPro
IPR005228 CHP00251
IPR003746 DUF167
IPR036591 YggU-like_sf
PANTHERiPTHR13420:SF7 PTHR13420:SF7, 1 hit
PfamiView protein in Pfam
PF02594 DUF167, 1 hit
SMARTiView protein in SMART
SM01152 DUF167, 1 hit
SUPFAMiSSF69786 SSF69786, 1 hit
TIGRFAMsiTIGR00251 TIGR00251, 1 hit

Sequencei

Sequence statusi: Complete.

P52060-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNAVTVNDDG LVLRLYIQPK ASRDSIVGLH GDEVKVAITA PPVDGQANSH
60 70 80 90
LVKFLGKQFR VAKSQVVIEK GELGRHKQIK IINPQQIPPE IAALIN
Length:96
Mass (Da):10,456
Last modified:May 30, 2000 - v2
Checksum:iF048F5BF11C16C57
GO

Sequence cautioni

The sequence AAA69120 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA Translation: AAA69120.1 Different initiation.
U00096 Genomic DNA Translation: AAC75990.2
AP009048 Genomic DNA Translation: BAE77016.1
PIRiH65080
RefSeqiNP_417428.2, NC_000913.3
WP_000994920.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75990; AAC75990; b2953
BAE77016; BAE77016; BAE77016
GeneIDi947424
KEGGiecj:JW5479
eco:b2953
PATRICifig|511145.12.peg.3047

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA Translation: AAA69120.1 Different initiation.
U00096 Genomic DNA Translation: AAC75990.2
AP009048 Genomic DNA Translation: BAE77016.1
PIRiH65080
RefSeqiNP_417428.2, NC_000913.3
WP_000994920.1, NZ_LN832404.1

3D structure databases

ProteinModelPortaliP52060
SMRiP52060
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259417, 167 interactors
IntActiP52060, 3 interactors
STRINGi316385.ECDH10B_3128

Proteomic databases

PaxDbiP52060
PRIDEiP52060

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75990; AAC75990; b2953
BAE77016; BAE77016; BAE77016
GeneIDi947424
KEGGiecj:JW5479
eco:b2953
PATRICifig|511145.12.peg.3047

Organism-specific databases

EchoBASEiEB2806
EcoGeneiEG12981 yggU

Phylogenomic databases

eggNOGiENOG4105VZ9 Bacteria
COG1872 LUCA
HOGENOMiHOG000019208
InParanoidiP52060
KOiK09131
PhylomeDBiP52060

Enzyme and pathway databases

BioCyciEcoCyc:G7529-MONOMER

Miscellaneous databases

PROiPR:P52060

Family and domain databases

Gene3Di3.30.1200.10, 1 hit
HAMAPiMF_00634 UPF0235, 1 hit
InterProiView protein in InterPro
IPR005228 CHP00251
IPR003746 DUF167
IPR036591 YggU-like_sf
PANTHERiPTHR13420:SF7 PTHR13420:SF7, 1 hit
PfamiView protein in Pfam
PF02594 DUF167, 1 hit
SMARTiView protein in SMART
SM01152 DUF167, 1 hit
SUPFAMiSSF69786 SSF69786, 1 hit
TIGRFAMsiTIGR00251 TIGR00251, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiYGGU_ECOLI
AccessioniPrimary (citable) accession number: P52060
Secondary accession number(s): Q2M9P0
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: May 30, 2000
Last modified: November 7, 2018
This is version 114 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
  3. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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