UniProtKB - P52007 (YECM_ECOLI)
Protein
Protein YecM
Gene
yecM
Organism
Escherichia coli (strain K12)
Status
Names & Taxonomyi
Protein namesi | Recommended name: Protein YecM |
Gene namesi | Name:yecM Synonyms:yecL Ordered Locus Names:b1875, JW5309 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000169079 | 1 – 188 | Protein YecMAdd BLAST | 188 |
Proteomic databases
jPOSTi | P52007 |
PaxDbi | P52007 |
PRIDEi | P52007 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 4262119, 9 interactors |
STRINGi | 511145.b1875 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | P52007 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | P52007 |
Family & Domainsi
Sequence similaritiesi
To H.influenzae HI_1582/HI_1581.Curated
Phylogenomic databases
eggNOGi | COG3102, Bacteria |
HOGENOMi | CLU_122770_0_0_6 |
InParanoidi | P52007 |
Family and domain databases
CDDi | cd07268, VOC_EcYecM_like, 1 hit |
Gene3Di | 3.10.180.10, 1 hit |
InterProi | View protein in InterPro IPR010393, DUF991 IPR029068, Glyas_Bleomycin-R_OHBP_Dase |
PANTHERi | PTHR37519, PTHR37519, 1 hit |
Pfami | View protein in Pfam PF06185, YecM, 1 hit |
SUPFAMi | SSF54593, SSF54593, 1 hit |
i Sequence
Sequence statusi: Complete.
P52007-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MANWQSIDEL QDIASDLPRF IHALDELSRR LGLNITPLTA DHISLRCHQN
60 70 80 90 100
ATAERWRRGF EQCGELLSEN MINGRPICLF KLHEPVQVAH WQFSIVELPW
110 120 130 140 150
PGEKRYPHEG WEHIEIVLPG DPETLNARAL ALLSDEGLSL PGISVKTSSP
160 170 180
KGEHERLPNP TLAVTDGKTT IKFHPWSIEE IVASEQSA
Sequence cautioni
The sequence AAA89200 differs from that shown. Reason: Frameshift.Curated
The sequence AAA89201 differs from that shown. Reason: Frameshift. Produces two separate ORFs.Curated
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 102 | G → R in AAA89200 (Ref. 4) Curated | 1 | |
Sequence conflicti | 120 | G → V in AAA89200 (Ref. 4) Curated | 1 | |
Sequence conflicti | 167 | G → A in AAA89201 (Ref. 4) Curated | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U00096 Genomic DNA Translation: AAC74945.2 AP009048 Genomic DNA Translation: BAA15685.2 L38618 Genomic DNA Translation: AAA89200.1 Frameshift. L38618 Genomic DNA Translation: AAA89201.1 Frameshift. |
PIRi | C64950 |
RefSeqi | NP_416389.4, NC_000913.3 WP_001326725.1, NZ_SSZK01000001.1 |
Genome annotation databases
EnsemblBacteriai | AAC74945; AAC74945; b1875 BAA15685; BAA15685; BAA15685 |
GeneIDi | 57731274 946415 |
KEGGi | ecj:JW5309 eco:b1875 |
PATRICi | fig|1411691.4.peg.373 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U00096 Genomic DNA Translation: AAC74945.2 AP009048 Genomic DNA Translation: BAA15685.2 L38618 Genomic DNA Translation: AAA89200.1 Frameshift. L38618 Genomic DNA Translation: AAA89201.1 Frameshift. |
PIRi | C64950 |
RefSeqi | NP_416389.4, NC_000913.3 WP_001326725.1, NZ_SSZK01000001.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1K4N | X-ray | 1.60 | A | 1-188 | [»] | |
SMRi | P52007 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
BioGRIDi | 4262119, 9 interactors |
STRINGi | 511145.b1875 |
Proteomic databases
jPOSTi | P52007 |
PaxDbi | P52007 |
PRIDEi | P52007 |
Genome annotation databases
EnsemblBacteriai | AAC74945; AAC74945; b1875 BAA15685; BAA15685; BAA15685 |
GeneIDi | 57731274 946415 |
KEGGi | ecj:JW5309 eco:b1875 |
PATRICi | fig|1411691.4.peg.373 |
Organism-specific databases
EchoBASEi | EB3181 |
Phylogenomic databases
eggNOGi | COG3102, Bacteria |
HOGENOMi | CLU_122770_0_0_6 |
InParanoidi | P52007 |
Enzyme and pathway databases
BioCyci | EcoCyc:G7025-MONOMER |
Miscellaneous databases
EvolutionaryTracei | P52007 |
PROi | PR:P52007 |
Family and domain databases
CDDi | cd07268, VOC_EcYecM_like, 1 hit |
Gene3Di | 3.10.180.10, 1 hit |
InterProi | View protein in InterPro IPR010393, DUF991 IPR029068, Glyas_Bleomycin-R_OHBP_Dase |
PANTHERi | PTHR37519, PTHR37519, 1 hit |
Pfami | View protein in Pfam PF06185, YecM, 1 hit |
SUPFAMi | SSF54593, SSF54593, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YECM_ECOLI | |
Accessioni | P52007Primary (citable) accession number: P52007 Secondary accession number(s): P52008, P76295 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | October 1, 1996 |
Last sequence update: | July 15, 1998 | |
Last modified: | April 7, 2021 | |
This is version 136 of the entry and version 3 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Reference proteomeDocuments
- PDB cross-references
Index of Protein Data Bank (PDB) cross-references