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Protein

60S ribosomal protein L9

Gene

Rpl9

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • rRNA binding Source: InterPro
  • structural constituent of ribosome Source: GO_Central

GO - Biological processi

  • cytoplasmic translation Source: GO_Central
  • translation Source: MGI

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, Tumor antigen

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L9
Gene namesi
Name:Rpl9
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 5

Organism-specific databases

MGIiMGI:1298373 Rpl9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001310991 – 19260S ribosomal protein L9Add BLAST192

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei121N6-acetyllysineBy similarity1

Keywords - PTMi

Acetylation

Proteomic databases

EPDiP51410
PaxDbiP51410
PeptideAtlasiP51410
PRIDEiP51410

PTM databases

iPTMnetiP51410
PhosphoSitePlusiP51410
SwissPalmiP51410

Expressioni

Gene expression databases

BgeeiENSMUSG00000047215 Expressed in 178 organ(s), highest expression level in thymus
CleanExiMM_RPL9
ExpressionAtlasiP51410 baseline and differential
GenevisibleiP51410 MM

Interactioni

Protein-protein interaction databases

BioGridi202989, 5 interactors
IntActiP51410, 3 interactors
MINTiP51410
STRINGi10090.ENSMUSP00000109399

Structurei

3D structure databases

ProteinModelPortaliP51410
SMRiP51410
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3255 Eukaryota
COG0097 LUCA
GeneTreeiENSGT00390000015224
HOGENOMiHOG000039905
HOVERGENiHBG000942
InParanoidiP51410
KOiK02940
OMAiVFQDGIY
OrthoDBiEOG091G0R6Z
PhylomeDBiP51410
TreeFamiTF300033

Family and domain databases

Gene3Di3.90.930.12, 2 hits
InterProiView protein in InterPro
IPR000702 Ribosomal_L6
IPR020040 Ribosomal_L6_a/b-dom
IPR036789 Ribosomal_L6_a/b-dom_sf
IPR002359 Ribosomal_L6_CS2
PANTHERiPTHR11655 PTHR11655, 1 hit
PfamiView protein in Pfam
PF00347 Ribosomal_L6, 2 hits
PIRSFiPIRSF002162 Ribosomal_L6, 1 hit
SUPFAMiSSF56053 SSF56053, 2 hits
PROSITEiView protein in PROSITE
PS00700 RIBOSOMAL_L6_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

P51410-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKTILSNQTV DIPENVEITL KGRTVIVKGP RGTLRRDFNH INVELSLLGK
60 70 80 90 100
KKKRLRVDKW WGNRKELATV RTICSHVQNM IKGVTLGFRY KMRSVYAHFP
110 120 130 140 150
INVVIQENGS LVEIRNFLGE KYIRRVRMRT GVACSVSQAQ KDELILEGND
160 170 180 190
IELVSNSAAL IQQATTVKNK DIRKFLDGIY VSEKGTVQQA DE
Length:192
Mass (Da):21,881
Last modified:July 11, 2002 - v2
Checksum:i94948BA07E86BBEB
GO

Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
D3Z629D3Z629_MOUSE
60S ribosomal protein L9
Rpl9
166Annotation score:
D3YZT0D3YZT0_MOUSE
60S ribosomal protein L9
Rpl9
108Annotation score:
A0A0G2JES3A0A0G2JES3_MOUSE
60S ribosomal protein L9
Rpl9
191Annotation score:
A0A0G2JFQ3A0A0G2JFQ3_MOUSE
60S ribosomal protein L9
Rpl9
66Annotation score:

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural varianti47L → H in UV-induced tumor 6132A antigen. 1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF260271 mRNA Translation: AAF70508.1
AK012331 mRNA Translation: BAB28167.1
AK012445 mRNA Translation: BAB28244.1
AK017388 mRNA Translation: BAB30725.1
AK017427 mRNA Translation: BAB30739.1
AK084278 mRNA Translation: BAC39154.1
BC013165 mRNA Translation: AAH13165.1
BC081435 mRNA Translation: AAH81435.1
BC083166 mRNA Translation: AAH83166.1
BC083329 mRNA Translation: AAH83329.1
U17332 mRNA Translation: AAA85686.1
U17331 mRNA Translation: AAA85685.1
CCDSiCCDS39097.1
RefSeqiNP_035422.1, NM_011292.2
UniGeneiMm.300271
Mm.383918
Mm.422908

Genome annotation databases

EnsembliENSMUST00000057885; ENSMUSP00000109399; ENSMUSG00000047215
ENSMUST00000120094; ENSMUSP00000113704; ENSMUSG00000047215
GeneIDi20005
KEGGimmu:20005
UCSCiuc008xnp.2 mouse

Keywords - Coding sequence diversityi

Polymorphism

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF260271 mRNA Translation: AAF70508.1
AK012331 mRNA Translation: BAB28167.1
AK012445 mRNA Translation: BAB28244.1
AK017388 mRNA Translation: BAB30725.1
AK017427 mRNA Translation: BAB30739.1
AK084278 mRNA Translation: BAC39154.1
BC013165 mRNA Translation: AAH13165.1
BC081435 mRNA Translation: AAH81435.1
BC083166 mRNA Translation: AAH83166.1
BC083329 mRNA Translation: AAH83329.1
U17332 mRNA Translation: AAA85686.1
U17331 mRNA Translation: AAA85685.1
CCDSiCCDS39097.1
RefSeqiNP_035422.1, NM_011292.2
UniGeneiMm.300271
Mm.383918
Mm.422908

3D structure databases

ProteinModelPortaliP51410
SMRiP51410
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi202989, 5 interactors
IntActiP51410, 3 interactors
MINTiP51410
STRINGi10090.ENSMUSP00000109399

PTM databases

iPTMnetiP51410
PhosphoSitePlusiP51410
SwissPalmiP51410

Proteomic databases

EPDiP51410
PaxDbiP51410
PeptideAtlasiP51410
PRIDEiP51410

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000057885; ENSMUSP00000109399; ENSMUSG00000047215
ENSMUST00000120094; ENSMUSP00000113704; ENSMUSG00000047215
GeneIDi20005
KEGGimmu:20005
UCSCiuc008xnp.2 mouse

Organism-specific databases

CTDi6133
MGIiMGI:1298373 Rpl9

Phylogenomic databases

eggNOGiKOG3255 Eukaryota
COG0097 LUCA
GeneTreeiENSGT00390000015224
HOGENOMiHOG000039905
HOVERGENiHBG000942
InParanoidiP51410
KOiK02940
OMAiVFQDGIY
OrthoDBiEOG091G0R6Z
PhylomeDBiP51410
TreeFamiTF300033

Miscellaneous databases

PROiPR:P51410
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000047215 Expressed in 178 organ(s), highest expression level in thymus
CleanExiMM_RPL9
ExpressionAtlasiP51410 baseline and differential
GenevisibleiP51410 MM

Family and domain databases

Gene3Di3.90.930.12, 2 hits
InterProiView protein in InterPro
IPR000702 Ribosomal_L6
IPR020040 Ribosomal_L6_a/b-dom
IPR036789 Ribosomal_L6_a/b-dom_sf
IPR002359 Ribosomal_L6_CS2
PANTHERiPTHR11655 PTHR11655, 1 hit
PfamiView protein in Pfam
PF00347 Ribosomal_L6, 2 hits
PIRSFiPIRSF002162 Ribosomal_L6, 1 hit
SUPFAMiSSF56053 SSF56053, 2 hits
PROSITEiView protein in PROSITE
PS00700 RIBOSOMAL_L6_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRL9_MOUSE
AccessioniPrimary (citable) accession number: P51410
Secondary accession number(s): Q9JK58
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: July 11, 2002
Last modified: November 7, 2018
This is version 155 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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