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Protein

60S ribosomal protein L9

Gene

RpL9

Organism
Drosophila melanogaster (Fruit fly)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • cytoplasmic translation Source: FlyBase

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-DME-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-DME-1799339 SRP-dependent cotranslational protein targeting to membrane
R-DME-72689 Formation of a pool of free 40S subunits
R-DME-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-DME-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-DME-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L9
Gene namesi
Name:RpL9
Synonyms:M(2)32D
ORF Names:CG6141
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 2L

Organism-specific databases

FlyBaseiFBgn0015756 RpL9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001311021 – 19060S ribosomal protein L9Add BLAST190

Proteomic databases

PaxDbiP50882
PRIDEiP50882

Expressioni

Gene expression databases

BgeeiFBgn0015756
ExpressionAtlasiP50882 baseline and differential
GenevisibleiP50882 DM

Interactioni

Protein-protein interaction databases

BioGridi60590, 25 interactors
DIPiDIP-20042N
IntActiP50882, 22 interactors
MINTiP50882
STRINGi7227.FBpp0079752

Structurei

3D structure databases

ProteinModelPortaliP50882
SMRiP50882
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3255 Eukaryota
COG0097 LUCA
InParanoidiP50882
KOiK02940
OMAiVFQDGIY
OrthoDBiEOG091G0R6Z
PhylomeDBiP50882

Family and domain databases

Gene3Di3.90.930.12, 2 hits
InterProiView protein in InterPro
IPR000702 Ribosomal_L6
IPR020040 Ribosomal_L6_a/b-dom
IPR036789 Ribosomal_L6_a/b-dom_sf
IPR002359 Ribosomal_L6_CS2
PANTHERiPTHR11655 PTHR11655, 1 hit
PfamiView protein in Pfam
PF00347 Ribosomal_L6, 2 hits
PIRSFiPIRSF002162 Ribosomal_L6, 1 hit
SUPFAMiSSF56053 SSF56053, 2 hits
PROSITEiView protein in PROSITE
PS00700 RIBOSOMAL_L6_2, 1 hit

Sequencei

Sequence statusi: Complete.

P50882-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTINSNQCV KIPKDIKASV KARVVTITGT RGTLKRSFKH LALDMYMPDK
60 70 80 90 100
RTLKVEKWFG TKKELAAVRT VCSHIENMIK GVTFGFQYKM RAVYAHFPIN
110 120 130 140 150
CVTSENNTVI EIRNFLGEKY IRRVEMAPGV TVVNSTAQKD ELIVEGNDIE
160 170 180 190
SVSGSAALIQ QSTTVKNKDI RKFLDGLYVS EKTTVVKLES
Length:190
Mass (Da):21,392
Last modified:June 1, 2001 - v2
Checksum:i689B2520ACDA12D3
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti37S → T in CAA64319 (PubMed:8676882).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X94613 Genomic DNA Translation: CAA64319.1
AE014134 Genomic DNA Translation: AAF53048.2
AE014134 Genomic DNA Translation: AAF53049.1
BT022718 mRNA Translation: AAY55134.1
PIRiJC6062
RefSeqiNP_001285826.1, NM_001298897.1
NP_477161.1, NM_057813.4
NP_723644.1, NM_164955.2
UniGeneiDm.403

Genome annotation databases

EnsemblMetazoaiFBtr0080163; FBpp0079752; FBgn0015756
FBtr0080164; FBpp0079753; FBgn0015756
FBtr0340226; FBpp0309201; FBgn0015756
GeneIDi34526
KEGGidme:Dmel_CG6141

Similar proteinsi

Entry informationi

Entry nameiRL9_DROME
AccessioniPrimary (citable) accession number: P50882
Secondary accession number(s): A4V0M0
, Q4V5D8, Q9VKL6, Q9VKL7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1996
Last sequence update: June 1, 2001
Last modified: July 18, 2018
This is version 144 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Drosophila
    Drosophila: entries, gene names and cross-references to FlyBase
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. Ribosomal proteins
    Ribosomal proteins families and list of entries
  4. SIMILARITY comments
    Index of protein domains and families

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