UniProtKB - P50840 (YPSC_BACSU)
Protein
Putative RNA methyltransferase YpsC
Gene
ypsC
Organism
Bacillus subtilis (strain 168)
Status
Functioni
GO - Molecular functioni
- RNA binding Source: InterPro
- rRNA (guanine-N2-)-methyltransferase activity Source: GO_Central
- rRNA (guanine-N7-)-methyltransferase activity Source: GO_Central
Keywordsi
Molecular function | Methyltransferase, Transferase |
Enzyme and pathway databases
BioCyci | BSUB:BSU22170-MONOMER |
Names & Taxonomyi
Protein namesi | |
Gene namesi | Name:ypsC Ordered Locus Names:BSU22170 |
Organismi | Bacillus subtilis (strain 168) |
Taxonomic identifieri | 224308 [NCBI] |
Taxonomic lineagei | Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000036182 | 1 – 385 | Putative RNA methyltransferase YpsCAdd BLAST | 385 |
Proteomic databases
PaxDbi | P50840 |
PRIDEi | P50840 |
Interactioni
Subunit structurei
Interacts with the RNA polymerase core.
1 PublicationProtein-protein interaction databases
STRINGi | 224308.BSU22170 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 44 – 156 | THUMPPROSITE-ProRule annotationAdd BLAST | 113 |
Sequence similaritiesi
Belongs to the methyltransferase superfamily.Curated
Phylogenomic databases
eggNOGi | COG0116, Bacteria |
InParanoidi | P50840 |
OMAi | GFMYKAN |
PhylomeDBi | P50840 |
Family and domain databases
InterProi | View protein in InterPro IPR002052, DNA_methylase_N6_adenine_CS IPR000241, RNA_methylase_dom IPR029063, SAM-dependent_MTases IPR004114, THUMP_dom |
Pfami | View protein in Pfam PF02926, THUMP, 1 hit PF01170, UPF0020, 1 hit |
SMARTi | View protein in SMART SM00981, THUMP, 1 hit |
SUPFAMi | SSF53335, SSF53335, 1 hit |
PROSITEi | View protein in PROSITE PS00092, N6_MTASE, 1 hit PS51165, THUMP, 1 hit PS01261, UPF0020, 1 hit |
i Sequence
Sequence statusi: Complete.
P50840-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKKYTLIATA PMGIEAVVAK EVRDLGYECK VDNGKVIFEG DALAICRANL
60 70 80 90 100
WLRTADRIKV QVASFKAKTF DELFEKTKAI NWRSFIPENG KFPVIGKSVK
110 120 130 140 150
STLASVPDCQ RIVKKAIVEK LKLQSGKAND WIEETGAEYK VEISLLKDQA
160 170 180 190 200
LITLDSSGTG LHKRGYRVDQ GGAPIKETLA AALVQLTNWT PDRPFVDPFC
210 220 230 240 250
GSGTIAIEAA LIGQNIAPGF NRDFVSEDWE WIGKDLWNKA RLEVEEKANY
260 270 280 290 300
DQPLTIFASD IDHRMVQIAK ENAEEAGLGD LIQFKQMQVK DFTTNLEFGV
310 320 330 340 350
IVGNPPYGER LGEKKAVEQM YKEMGQAFEP LDTWSVYMLT SNENFEEAYG
360 370 380
RKATKKRKLF NGFIKTDYYQ YWSKVRPQRK KTENA
Sequence cautioni
The sequence M13175 differs from that shown. Reason: Frameshift.Curated
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | L47838 Genomic DNA Translation: AAB38473.1 AL009126 Genomic DNA Translation: CAB14134.1 M13175 Genomic DNA No translation available. |
PIRi | F69941 |
RefSeqi | NP_390099.1, NC_000964.3 WP_009967571.1, NZ_JNCM01000036.1 |
Genome annotation databases
EnsemblBacteriai | CAB14134; CAB14134; BSU22170 |
GeneIDi | 939057 |
KEGGi | bsu:BSU22170 |
PATRICi | fig|224308.179.peg.2421 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | L47838 Genomic DNA Translation: AAB38473.1 AL009126 Genomic DNA Translation: CAB14134.1 M13175 Genomic DNA No translation available. |
PIRi | F69941 |
RefSeqi | NP_390099.1, NC_000964.3 WP_009967571.1, NZ_JNCM01000036.1 |
3D structure databases
SMRi | P50840 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 224308.BSU22170 |
Proteomic databases
PaxDbi | P50840 |
PRIDEi | P50840 |
Genome annotation databases
EnsemblBacteriai | CAB14134; CAB14134; BSU22170 |
GeneIDi | 939057 |
KEGGi | bsu:BSU22170 |
PATRICi | fig|224308.179.peg.2421 |
Phylogenomic databases
eggNOGi | COG0116, Bacteria |
InParanoidi | P50840 |
OMAi | GFMYKAN |
PhylomeDBi | P50840 |
Enzyme and pathway databases
BioCyci | BSUB:BSU22170-MONOMER |
Family and domain databases
InterProi | View protein in InterPro IPR002052, DNA_methylase_N6_adenine_CS IPR000241, RNA_methylase_dom IPR029063, SAM-dependent_MTases IPR004114, THUMP_dom |
Pfami | View protein in Pfam PF02926, THUMP, 1 hit PF01170, UPF0020, 1 hit |
SMARTi | View protein in SMART SM00981, THUMP, 1 hit |
SUPFAMi | SSF53335, SSF53335, 1 hit |
PROSITEi | View protein in PROSITE PS00092, N6_MTASE, 1 hit PS51165, THUMP, 1 hit PS01261, UPF0020, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YPSC_BACSU | |
Accessioni | P50840Primary (citable) accession number: P50840 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | October 1, 1996 |
Last sequence update: | October 1, 1996 | |
Last modified: | December 2, 2020 | |
This is version 127 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families