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Protein

40S ribosomal protein S8

Gene

RPS8

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • structural constituent of ribosome Source: GO_Central

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-OSA-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-OSA-1799339 SRP-dependent cotranslational protein targeting to membrane
R-OSA-72689 Formation of a pool of free 40S subunits
R-OSA-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-OSA-72702 Ribosomal scanning and start codon recognition
R-OSA-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-OSA-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-OSA-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S8
Gene namesi
Name:RPS8
Ordered Locus Names:Os02g0489400, LOC_Os02g28810
ORF Names:OsJ_06781Imported, OSJNBa0048K16.2, P0483C08.42
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001222541 – 22040S ribosomal protein S8Add BLAST220

Proteomic databases

PaxDbiP49199
PRIDEiP49199

Expressioni

Gene expression databases

ExpressionAtlasiP49199 differential
GenevisibleiP49199 OS

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os02g28810.1

Structurei

3D structure databases

ProteinModelPortaliP49199
SMRiP49199
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3283 Eukaryota
COG2007 LUCA
HOGENOMiHOG000211544
InParanoidiP49199
KOiK02995
OMAiAWGSEHV
OrthoDBiEOG09360O4Q

Family and domain databases

InterProiView protein in InterPro
IPR001047 Ribosomal_S8e
IPR022309 Ribosomal_S8e/biogenesis_NSA2
IPR018283 Ribosomal_S8e_CS
PANTHERiPTHR10394 PTHR10394, 1 hit
PfamiView protein in Pfam
PF01201 Ribosomal_S8e, 1 hit
TIGRFAMsiTIGR00307 eS8, 1 hit
PROSITEiView protein in PROSITE
PS01193 RIBOSOMAL_S8E, 1 hit

Sequencei

Sequence statusi: Complete.

P49199-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGISRDSMHK RRATGGKQKA WRKKRKYELG RQPANTKLSS NKTVRRVRVR
60 70 80 90 100
GGNVKWRALR LDTGNYSWGS EAVTRKTRIL DVVYNASNNE LVRTQTLVKS
110 120 130 140 150
AIVQVDAAPF KQWYLTHYGV DIGRKKKAPA AKKDAEGQDA EATTEEAKKS
160 170 180 190 200
NHVVRKLEKR QQGRTLDAHI EEQFGSGRLL ACISSRPGQC GRADGYILEG
210 220
KELEFYMKKL QRKKGKGASA
Length:220
Mass (Da):24,829
Last modified:June 27, 2006 - v2
Checksum:i5545DCD0BBB25F7E
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti128 – 136APAAKKDAE → EPPHPRGCC in BAA07207 (PubMed:7770536).Curated9

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D38010 mRNA Translation: BAA07207.1
AP004837 Genomic DNA Translation: BAD21871.1
AP004864 Genomic DNA Translation: BAD21876.1
AP008208 Genomic DNA Translation: BAF08780.1
AP014958 Genomic DNA Translation: BAS78730.1
CM000139 Genomic DNA Translation: EEE57012.1
AK102757 mRNA Translation: BAG95703.1
PIRiT04082
RefSeqiXP_015627504.1, XM_015772018.1
UniGeneiOs.4748

Genome annotation databases

EnsemblPlantsiOs02t0489400-01; Os02t0489400-01; Os02g0489400
GeneIDi4329381
GrameneiOs02t0489400-01; Os02t0489400-01; Os02g0489400
KEGGiosa:4329381

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D38010 mRNA Translation: BAA07207.1
AP004837 Genomic DNA Translation: BAD21871.1
AP004864 Genomic DNA Translation: BAD21876.1
AP008208 Genomic DNA Translation: BAF08780.1
AP014958 Genomic DNA Translation: BAS78730.1
CM000139 Genomic DNA Translation: EEE57012.1
AK102757 mRNA Translation: BAG95703.1
PIRiT04082
RefSeqiXP_015627504.1, XM_015772018.1
UniGeneiOs.4748

3D structure databases

ProteinModelPortaliP49199
SMRiP49199
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os02g28810.1

Proteomic databases

PaxDbiP49199
PRIDEiP49199

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOs02t0489400-01; Os02t0489400-01; Os02g0489400
GeneIDi4329381
GrameneiOs02t0489400-01; Os02t0489400-01; Os02g0489400
KEGGiosa:4329381

Phylogenomic databases

eggNOGiKOG3283 Eukaryota
COG2007 LUCA
HOGENOMiHOG000211544
InParanoidiP49199
KOiK02995
OMAiAWGSEHV
OrthoDBiEOG09360O4Q

Enzyme and pathway databases

ReactomeiR-OSA-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-OSA-1799339 SRP-dependent cotranslational protein targeting to membrane
R-OSA-72689 Formation of a pool of free 40S subunits
R-OSA-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-OSA-72702 Ribosomal scanning and start codon recognition
R-OSA-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-OSA-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-OSA-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Gene expression databases

ExpressionAtlasiP49199 differential
GenevisibleiP49199 OS

Family and domain databases

InterProiView protein in InterPro
IPR001047 Ribosomal_S8e
IPR022309 Ribosomal_S8e/biogenesis_NSA2
IPR018283 Ribosomal_S8e_CS
PANTHERiPTHR10394 PTHR10394, 1 hit
PfamiView protein in Pfam
PF01201 Ribosomal_S8e, 1 hit
TIGRFAMsiTIGR00307 eS8, 1 hit
PROSITEiView protein in PROSITE
PS01193 RIBOSOMAL_S8E, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRS8_ORYSJ
AccessioniPrimary (citable) accession number: P49199
Secondary accession number(s): Q0E158, Q6K771
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: June 27, 2006
Last modified: May 23, 2018
This is version 96 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
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