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Protein

60S ribosomal protein L36

Gene

rpl-36

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Component of the large ribosomal subunit.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L36
Gene namesi
Name:rpl-36
ORF Names:F37C12.4
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiF37C12.4 ; CE30781 ; WBGene00004450 ; rpl-36

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001950102 – 10460S ribosomal protein L36Add BLAST103

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylserine1 Publication1

Keywords - PTMi

Acetylation

Proteomic databases

EPDiP49181
PaxDbiP49181
PeptideAtlasiP49181
PRIDEiP49181

PTM databases

iPTMnetiP49181

Expressioni

Gene expression databases

BgeeiWBGene00004450

Interactioni

Subunit structurei

Component of the large ribosomal subunit.By similarity

Binary interactionsi

WithEntry#Exp.IntActNotes
rnf-1O014823EBI-321339,EBI-315611

Protein-protein interaction databases

BioGridi41219, 5 interactors
IntActiP49181, 1 interactor
STRINGi6239.F37C12.4.2

Structurei

3D structure databases

ProteinModelPortaliP49181
SMRiP49181
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3452 Eukaryota
COG5051 LUCA
GeneTreeiENSGT00390000011943
HOGENOMiHOG000155312
InParanoidiP49181
KOiK02920
OMAiGTHRRAK
OrthoDBiEOG091G0YP6
PhylomeDBiP49181

Family and domain databases

Gene3Di1.10.10.1760, 1 hit
InterProiView protein in InterPro
IPR038097 L36e_sf
IPR000509 Ribosomal_L36e
PANTHERiPTHR10114 PTHR10114, 1 hit
PfamiView protein in Pfam
PF01158 Ribosomal_L36e, 1 hit
PROSITEiView protein in PROSITE
PS01190 RIBOSOMAL_L36E, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P49181-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGPGIEGLA VGLNKGHAAT QLPVKQRQNR HKGVASKKTK IVRELVREIT
60 70 80 90 100
GFAPYERRVL EMLRISKDKR ALKFLKRRIG THRRAKGKRE ELQNVIIAQR

KAHK
Length:104
Mass (Da):11,884
Last modified:January 23, 2007 - v3
Checksum:iB0D731E1032E323D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO081316 Genomic DNA Translation: CCD70737.1
PIRiT28834
RefSeqiNP_498573.2, NM_066172.7
UniGeneiCel.20089

Genome annotation databases

EnsemblMetazoaiF37C12.4.1; F37C12.4.1; WBGene00004450
F37C12.4.2; F37C12.4.2; WBGene00004450
GeneIDi176007
KEGGicel:CELE_F37C12.4
UCSCiF37C12.4.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiRL36_CAEEL
AccessioniPrimary (citable) accession number: P49181
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: January 23, 2007
Last modified: May 23, 2018
This is version 121 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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