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Protein

60S ribosomal protein L35a

Gene

rpl-33

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L35a
Gene namesi
Name:rpl-33
ORF Names:F10E7.7
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiF10E7.7 ; CE04362 ; WBGene00004447 ; rpl-33

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001928032 – 12460S ribosomal protein L35aAdd BLAST123

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanine1 Publication1

Keywords - PTMi

Acetylation

Proteomic databases

EPDiP49180
PaxDbiP49180
PeptideAtlasiP49180
PRIDEiP49180

PTM databases

iPTMnetiP49180

Expressioni

Gene expression databases

BgeeiWBGene00004447

Interactioni

Protein-protein interaction databases

STRINGi6239.F10E7.7.1

Structurei

3D structure databases

ProteinModelPortaliP49180
SMRiP49180
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG0887 Eukaryota
COG2451 LUCA
GeneTreeiENSGT00390000016972
HOGENOMiHOG000195636
InParanoidiP49180
KOiK02917
OMAiVRAIWGK
OrthoDBiEOG091G112U
PhylomeDBiP49180

Family and domain databases

Gene3Di2.40.10.190, 1 hit
HAMAPiMF_00573 Ribosomal_L35Ae, 1 hit
InterProiView protein in InterPro
IPR038661 L35A_sf
IPR001780 Ribosomal_L35A
IPR018266 Ribosomal_L35Ae_CS
IPR009000 Transl_B-barrel_sf
PANTHERiPTHR10902 PTHR10902, 1 hit
PfamiView protein in Pfam
PF01247 Ribosomal_L35Ae, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD012670 Ribosomal_L35Ae, 1 hit
SUPFAMiSSF50447 SSF50447, 1 hit
PROSITEiView protein in PROSITE
PS01105 RIBOSOMAL_L35AE, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P49180-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADTAVARRP SAPTTGRLYV KAIFTGFKRG LRTQSEHTSL LKLEGVFNKE
60 70 80 90 100
DAGFYAGKRV VYLYKAHNKT LKTGHTVATR TRAIWGKITR PHGNAGAVRA
110 120
KFHHNIPPSA LGKRIRVLLY PSNI
Length:124
Mass (Da):13,768
Last modified:January 23, 2007 - v3
Checksum:i775114FFC1FA9871
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO081111 Genomic DNA Translation: CCD69169.1
PIRiT34207
RefSeqiNP_495468.1, NM_063067.3
UniGeneiCel.8345

Genome annotation databases

EnsemblMetazoaiF10E7.7.1; F10E7.7.1; WBGene00004447
F10E7.7.2; F10E7.7.2; WBGene00004447
F10E7.7.3; F10E7.7.3; WBGene00004447
GeneIDi174166
KEGGicel:CELE_F10E7.7
UCSCiF10E7.7.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiRL35A_CAEEL
AccessioniPrimary (citable) accession number: P49180
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: January 23, 2007
Last modified: April 25, 2018
This is version 118 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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