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Protein

40S ribosomal protein S5

Gene

rps-5

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-CEL-72702 Ribosomal scanning and start codon recognition
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S5
Gene namesi
Name:rps-5
ORF Names:T05E11.1
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiT05E11.1 ; CE06360 ; WBGene00004474 ; rps-5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001245291 – 21040S ribosomal protein S5Add BLAST210

Proteomic databases

EPDiP49041
PaxDbiP49041
PeptideAtlasiP49041
PRIDEiP49041

PTM databases

iPTMnetiP49041

Expressioni

Gene expression databases

BgeeiWBGene00004474

Interactioni

Protein-protein interaction databases

BioGridi43111, 3 interactors
DIPiDIP-27472N
IntActiP49041, 1 interactor
STRINGi6239.T05E11.1.1

Structurei

3D structure databases

ProteinModelPortaliP49041
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3291 Eukaryota
COG0049 LUCA
GeneTreeiENSGT00390000010806
HOGENOMiHOG000039066
InParanoidiP49041
KOiK02989
OMAiDSLMMKG
OrthoDBiEOG091G0KXZ
PhylomeDBiP49041

Family and domain databases

CDDicd14867 uS7_Eukaryote, 1 hit
Gene3Di1.10.455.10, 1 hit
InterProiView protein in InterPro
IPR000235 Ribosomal_S5/S7
IPR005716 Ribosomal_S5/S7_euk/arc
IPR020606 Ribosomal_S7_CS
IPR023798 Ribosomal_S7_dom
IPR036823 Ribosomal_S7_dom_sf
PANTHERiPTHR11205 PTHR11205, 1 hit
PfamiView protein in Pfam
PF00177 Ribosomal_S7, 1 hit
PIRSFiPIRSF002122 RPS7p_RPS7a_RPS5e_RPS7o, 1 hit
SUPFAMiSSF47973 SSF47973, 1 hit
TIGRFAMsiTIGR01028 uS7_euk_arch, 1 hit
PROSITEiView protein in PROSITE
PS00052 RIBOSOMAL_S7, 1 hit

Sequencei

Sequence statusi: Complete.

P49041-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADNWGSENV VADAAPATEA PEVALFGKWS LQSVNVSDIS LVDYIPVKEK
60 70 80 90 100
SAKYLPHSAG RFQVRRFRKA ACPIVERLAN SLMMHGRNNG KKLMTVRIVK
110 120 130 140 150
HAFEIIYLLT GENPVQVLVN AVINSGPRED STRIGRAGTV RRQAVDVAPL
160 170 180 190 200
RRVNQAIWLL CTGAREAAFR NVKTIAECLA DELINAAKGS SNSYAIKKKD
210
ELERVAKSNR
Length:210
Mass (Da):23,155
Last modified:February 1, 1996 - v1
Checksum:i3A2C4059D3E8B57F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z68751 Genomic DNA Translation: CAA92971.1
PIRiT24519
RefSeqiNP_502077.1, NM_069676.3
UniGeneiCel.38758

Genome annotation databases

EnsemblMetazoaiT05E11.1; T05E11.1; WBGene00004474
GeneIDi178012
KEGGicel:CELE_T05E11.1
UCSCiT05E11.1.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiRS5_CAEEL
AccessioniPrimary (citable) accession number: P49041
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: May 23, 2018
This is version 119 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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