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Protein

40S ribosomal protein S8

Gene

rps-8

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-CEL-72702 Ribosomal scanning and start codon recognition
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S8
Gene namesi
Name:rps-8
ORF Names:F42C5.8
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiF42C5.8a ; CE04561 ; WBGene00004477 ; rps-8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001222461 – 20840S ribosomal protein S8Add BLAST208

Proteomic databases

EPDiP48156
PaxDbiP48156
PeptideAtlasiP48156
PRIDEiP48156

PTM databases

iPTMnetiP48156

Expressioni

Gene expression databases

BgeeiWBGene00004477
ExpressionAtlasiP48156 baseline

Interactioni

Protein-protein interaction databases

BioGridi42622, 6 interactors
DIPiDIP-26614N
STRINGi6239.F42C5.8.2

Structurei

3D structure databases

ProteinModelPortaliP48156
SMRiP48156
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3283 Eukaryota
COG2007 LUCA
GeneTreeiENSGT00390000012433
HOGENOMiHOG000211544
InParanoidiP48156
KOiK02995
OMAiAWGSEHV
OrthoDBiEOG091G0MF7
PhylomeDBiP48156

Family and domain databases

InterProiView protein in InterPro
IPR001047 Ribosomal_S8e
IPR022309 Ribosomal_S8e/biogenesis_NSA2
IPR018283 Ribosomal_S8e_CS
PANTHERiPTHR10394 PTHR10394, 1 hit
PfamiView protein in Pfam
PF01201 Ribosomal_S8e, 1 hit
TIGRFAMsiTIGR00307 eS8, 1 hit
PROSITEiView protein in PROSITE
PS01193 RIBOSOMAL_S8E, 1 hit

Sequencei

Sequence statusi: Complete.

P48156-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGISRDSWHK RYKTGATQPV PHKKRKFELG RPAANTKIGA HRVRLVRTRG
60 70 80 90 100
GNEKYRALRL DSGNFSWASE QTTRKTRIVD TMYNATNNEL VRTKTLVKGA
110 120 130 140 150
IISVDAAPFR QWYEAHYALP LARKKNAKLS EEDNAILNKK RSHHTMKKYT
160 170 180 190 200
ERQKTAAVDA LLIEQFNTGR LLARISSSPG QVGQANGYIL EGKELDFYLR

KIRAKKAK
Length:208
Mass (Da):23,750
Last modified:February 1, 1996 - v1
Checksum:iE1C38C2D21B86275
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080385 Genomic DNA Translation: CCD63349.1
PIRiT16343
RefSeqiNP_501167.1, NM_068766.4
UniGeneiCel.20547

Genome annotation databases

EnsemblMetazoaiF42C5.8a; F42C5.8a; WBGene00004477
GeneIDi177503
KEGGicel:CELE_F42C5.8
UCSCiF42C5.8.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiRS8_CAEEL
AccessioniPrimary (citable) accession number: P48156
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: May 23, 2018
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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