Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

40S ribosomal protein S3

Gene

rps-3

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-CEL-72702 Ribosomal scanning and start codon recognition
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S3
Gene namesi
Name:rps-3
ORF Names:C23G10.3
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome III

Organism-specific databases

WormBaseiC23G10.3 ; CE01810 ; WBGene00004472 ; rps-3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001303271 – 24740S ribosomal protein S3Add BLAST247

Proteomic databases

EPDiP48152
PaxDbiP48152
PeptideAtlasiP48152
PRIDEiP48152

Expressioni

Gene expression databases

BgeeiWBGene00004472

Interactioni

Protein-protein interaction databases

BioGridi41100, 8 interactors
DIPiDIP-25651N
IntActiP48152, 3 interactors
STRINGi6239.C23G10.3.2

Structurei

3D structure databases

ProteinModelPortaliP48152
SMRiP48152
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini23 – 94KH type-2PROSITE-ProRule annotationAdd BLAST72

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3181 Eukaryota
COG0092 LUCA
GeneTreeiENSGT00390000008610
HOGENOMiHOG000210611
InParanoidiP48152
KOiK02985
OMAiAVRHVLM
OrthoDBiEOG091G0I8D
PhylomeDBiP48152

Family and domain databases

Gene3Di3.30.1140.32, 1 hit
3.30.300.20, 1 hit
InterProiView protein in InterPro
IPR015946 KH_dom-like_a/b
IPR004044 KH_dom_type_2
IPR009019 KH_sf_prok-type
IPR001351 Ribosomal_S3_C
IPR036419 Ribosomal_S3_C_sf
IPR018280 Ribosomal_S3_CS
IPR005703 Ribosomal_S3_euk/arc
PfamiView protein in Pfam
PF07650 KH_2, 1 hit
PF00189 Ribosomal_S3_C, 1 hit
SUPFAMiSSF54814 SSF54814, 1 hit
SSF54821 SSF54821, 1 hit
TIGRFAMsiTIGR01008 uS3_euk_arch, 1 hit
PROSITEiView protein in PROSITE
PS50823 KH_TYPE_2, 1 hit
PS00548 RIBOSOMAL_S3, 1 hit

Sequencei

Sequence statusi: Complete.

P48152-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAANQNVTKK KKAVIGGIFK AELNNFLMKE LAEDGYSGVE VRSTPARAEV
60 70 80 90 100
IIMATRTQNV LGERGRRIKE LTSVVQKRFG FEEGSVELYA EKVSNRGLCA
110 120 130 140 150
VAQCESLRYK LVGGLAVRRA CYGVLRFIME SGAQGVEVIV SGKLRGQRAK
160 170 180 190 200
AMKFVDGLMI HSGHPVNDYI QQAVRHVQLR QGVIGIKVKI MLPYDPRGQN
210 220 230 240
GPRNALPDHV QIVEPQEEVL PKEPHSQHKE EKKDVQVPAA QPVAPVQ
Length:247
Mass (Da):27,314
Last modified:February 1, 1996 - v1
Checksum:iB6DB70D7DA975C2B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080630 Genomic DNA Translation: CCD65297.1
PIRiT15579
RefSeqiNP_498349.1, NM_065948.4
UniGeneiCel.10141

Genome annotation databases

EnsemblMetazoaiC23G10.3; C23G10.3; WBGene00004472
GeneIDi175879
KEGGicel:CELE_C23G10.3
UCSCiC23G10.3.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiRS3_CAEEL
AccessioniPrimary (citable) accession number: P48152
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1996
Last sequence update: February 1, 1996
Last modified: May 23, 2018
This is version 142 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health