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Protein

Single-stranded DNA-binding protein

Gene

ssb

Organism
Mycobacterium leprae (strain TN)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding

Enzyme and pathway databases

BioCyciMLEP272631:G1GT5-2939-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Single-stranded DNA-binding proteinUniRule annotation
Short name:
SSBUniRule annotation
Gene namesi
Name:ssb
Ordered Locus Names:ML2684
ORF Names:MLCB1913.20c
OrganismiMycobacterium leprae (strain TN)
Taxonomic identifieri272631 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
Proteomesi
  • UP000000806 Componenti: Chromosome

Organism-specific databases

LepromaiML2684

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000960671 – 168Single-stranded DNA-binding proteinAdd BLAST168

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi272631.ML2684

Structurei

Secondary structure

1168
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliP46390
SMRiP46390
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP46390

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 110SSBUniRule annotationAdd BLAST110

Phylogenomic databases

eggNOGiENOG4107YH6 Bacteria
COG0629 LUCA
HOGENOMiHOG000106485
KOiK03111
OMAiIATTDRW
OrthoDBiPOG091H00DP

Family and domain databases

CDDicd04496 SSB_OBF, 1 hit
HAMAPiMF_00984 SSB, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR000424 Primosome_PriB/ssb
IPR011344 ssDNA-bd
PANTHERiPTHR10302 PTHR10302, 1 hit
PTHR10302:SF0 PTHR10302:SF0, 1 hit
PfamiView protein in Pfam
PF00436 SSB, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00621 ssb, 1 hit
PROSITEiView protein in PROSITE
PS50935 SSB, 1 hit

Sequencei

Sequence statusi: Complete.

P46390-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAGDTTITIV GNLTADPELR FTSSGAAVVN FTVASTPRIY DRQSGEWKDG
60 70 80 90 100
EALFLRCNIW REAAENVAES LTRGARVIVT GRLKQRSFET REGEKRTVVE
110 120 130 140 150
VEVDEIGPSL RYATAKVNKA SRSGGGGGGF GSGSRQAPAQ MSGGVGDDPW
160
GSAPTSGSFG VGDEEPPF
Length:168
Mass (Da):17,701
Last modified:April 27, 2001 - v2
Checksum:i077C62E430623658
GO

Sequence cautioni

The sequence AAB53120 differs from that shown. Reason: Frameshift at position 137.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L39923 Genomic DNA Translation: AAB53120.1 Frameshift.
AL022118 Genomic DNA Translation: CAA17953.1
AL583926 Genomic DNA Translation: CAC32216.1
PIRiB87245
RefSeqiNP_302712.1, NC_002677.1
WP_010909031.1, NC_002677.1

Genome annotation databases

EnsemblBacteriaiCAC32216; CAC32216; CAC32216
GeneIDi908269
KEGGimle:ML2684
PATRICifig|272631.5.peg.5176

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L39923 Genomic DNA Translation: AAB53120.1 Frameshift.
AL022118 Genomic DNA Translation: CAA17953.1
AL583926 Genomic DNA Translation: CAC32216.1
PIRiB87245
RefSeqiNP_302712.1, NC_002677.1
WP_010909031.1, NC_002677.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3AFPX-ray2.05A/B1-168[»]
3AFQX-ray2.80A/B/C/D1-168[»]
ProteinModelPortaliP46390
SMRiP46390
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272631.ML2684

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAC32216; CAC32216; CAC32216
GeneIDi908269
KEGGimle:ML2684
PATRICifig|272631.5.peg.5176

Organism-specific databases

LepromaiML2684

Phylogenomic databases

eggNOGiENOG4107YH6 Bacteria
COG0629 LUCA
HOGENOMiHOG000106485
KOiK03111
OMAiIATTDRW
OrthoDBiPOG091H00DP

Enzyme and pathway databases

BioCyciMLEP272631:G1GT5-2939-MONOMER

Miscellaneous databases

EvolutionaryTraceiP46390

Family and domain databases

CDDicd04496 SSB_OBF, 1 hit
HAMAPiMF_00984 SSB, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR000424 Primosome_PriB/ssb
IPR011344 ssDNA-bd
PANTHERiPTHR10302 PTHR10302, 1 hit
PTHR10302:SF0 PTHR10302:SF0, 1 hit
PfamiView protein in Pfam
PF00436 SSB, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00621 ssb, 1 hit
PROSITEiView protein in PROSITE
PS50935 SSB, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiSSB_MYCLE
AccessioniPrimary (citable) accession number: P46390
Secondary accession number(s): O53126
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: April 27, 2001
Last modified: November 7, 2018
This is version 122 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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Main funding by: National Institutes of Health

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