UniProtKB - P42619 (YQJF_ECOLI)
Protein
Inner membrane protein YqjF
Gene
yqjF
Organism
Escherichia coli (strain K12)
Status
Names & Taxonomyi
Protein namesi | Recommended name: Inner membrane protein YqjF |
Gene namesi | Name:yqjF Ordered Locus Names:b3101, JW5850 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
Subcellular locationi
Plasma membrane
Plasma Membrane
- plasma membrane Source: EcoCyc
Other locations
- integral component of membrane Source: UniProtKB-KW
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Topological domaini | 1 – 5 | CytoplasmicSequence analysis | 5 | |
Transmembranei | 6 – 26 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 27 – 45 | PeriplasmicSequence analysisAdd BLAST | 19 | |
Transmembranei | 46 – 66 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 67 – 70 | CytoplasmicSequence analysis | 4 | |
Transmembranei | 71 – 91 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 92 – 101 | PeriplasmicSequence analysis | 10 | |
Transmembranei | 102 – 122 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 123 – 130 | CytoplasmicSequence analysis | 8 |
Keywords - Cellular componenti
Cell inner membrane, Cell membrane, MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000169435 | 1 – 130 | Inner membrane protein YqjFAdd BLAST | 130 |
Proteomic databases
PaxDbi | P42619 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 4259661, 3 interactors |
STRINGi | 511145.b3101 |
Family & Domainsi
Sequence similaritiesi
Belongs to the DoxX family.Curated
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | COG2259, Bacteria |
HOGENOMi | CLU_058421_8_3_6 |
InParanoidi | P42619 |
Family and domain databases
InterProi | View protein in InterPro IPR032808, DoxX |
Pfami | View protein in Pfam PF07681, DoxX, 1 hit |
i Sequence
Sequence statusi: Complete.
P42619-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKKLEDVGVL VARILMPILF ITAGWGKITG YAGTQQYMEA MGVPGFMLPL
60 70 80 90 100
VILLEFGGGL AILFGFLTRT TALFTAGFTL LTAFLFHSNF AEGVNSLMFM
110 120 130
KNLTISGGFL LLAITGPGAY SIDRLLNKKW
Sequence cautioni
The sequence AAA57905 differs from that shown. Reason: Erroneous initiation. Extended N-terminus.Curated
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U18997 Genomic DNA Translation: AAA57905.1 Different initiation. U00096 Genomic DNA Translation: AAC76136.2 AP009048 Genomic DNA Translation: BAE77151.1 |
RefSeqi | NP_417572.2, NC_000913.3 WP_000732240.1, NZ_SSTT01000003.1 |
Genome annotation databases
EnsemblBacteriai | AAC76136; AAC76136; b3101 BAE77151; BAE77151; BAE77151 |
GeneIDi | 947608 |
KEGGi | ecj:JW5850 eco:b3101 |
PATRICi | fig|511145.12.peg.3197 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U18997 Genomic DNA Translation: AAA57905.1 Different initiation. U00096 Genomic DNA Translation: AAC76136.2 AP009048 Genomic DNA Translation: BAE77151.1 |
RefSeqi | NP_417572.2, NC_000913.3 WP_000732240.1, NZ_SSTT01000003.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
BioGRIDi | 4259661, 3 interactors |
STRINGi | 511145.b3101 |
Proteomic databases
PaxDbi | P42619 |
Genome annotation databases
EnsemblBacteriai | AAC76136; AAC76136; b3101 BAE77151; BAE77151; BAE77151 |
GeneIDi | 947608 |
KEGGi | ecj:JW5850 eco:b3101 |
PATRICi | fig|511145.12.peg.3197 |
Organism-specific databases
EchoBASEi | EB2601 |
Phylogenomic databases
eggNOGi | COG2259, Bacteria |
HOGENOMi | CLU_058421_8_3_6 |
InParanoidi | P42619 |
Enzyme and pathway databases
BioCyci | EcoCyc:G7615-MONOMER |
Miscellaneous databases
PROi | PR:P42619 |
Family and domain databases
InterProi | View protein in InterPro IPR032808, DoxX |
Pfami | View protein in Pfam PF07681, DoxX, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YQJF_ECOLI | |
Accessioni | P42619Primary (citable) accession number: P42619 Secondary accession number(s): Q2M9A5 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 1, 1995 |
Last sequence update: | December 1, 2000 | |
Last modified: | December 2, 2020 | |
This is version 121 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families