UniProtKB - P42603 (YGJV_ECOLI)
Protein
Inner membrane protein YgjV
Gene
ygjV
Organism
Escherichia coli (strain K12)
Status
Functioni
Enzyme and pathway databases
BioCyci | EcoCyc:G7608-MONOMER |
Protein family/group databases
TCDBi | 9.B.221.1.1, the 5 tms ygjv (ygjv) family |
Names & Taxonomyi
Protein namesi | Recommended name: Inner membrane protein YgjV |
Gene namesi | Name:ygjV Ordered Locus Names:b3090, JW3061 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
Subcellular locationi
Plasma membrane
Plasma Membrane
- integral component of plasma membrane Source: EcoliWiki
- plasma membrane Source: EcoCyc
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Topological domaini | 1 – 2 | PeriplasmicSequence analysis | 2 | |
Transmembranei | 3 – 23 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 24 – 38 | CytoplasmicSequence analysisAdd BLAST | 15 | |
Transmembranei | 39 – 59 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 60 – 71 | PeriplasmicSequence analysisAdd BLAST | 12 | |
Transmembranei | 72 – 92 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 93 – 113 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 114 – 133 | PeriplasmicSequence analysisAdd BLAST | 20 | |
Transmembranei | 134 – 154 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 155 – 183 | CytoplasmicSequence analysisAdd BLAST | 29 |
Keywords - Cellular componenti
Cell inner membrane, Cell membrane, MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000169426 | 1 – 183 | Inner membrane protein YgjVAdd BLAST | 183 |
Proteomic databases
PaxDbi | P42603 |
PRIDEi | P42603 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 4262406, 11 interactors |
STRINGi | 511145.b3090 |
Family & Domainsi
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | ENOG502ZBTK, Bacteria |
HOGENOMi | CLU_107941_0_0_6 |
Family and domain databases
InterProi | View protein in InterPro IPR019629, Uncharacterised_HI1736/YgjV IPR026267, YgjV |
Pfami | View protein in Pfam PF10688, Imp-YgjV, 1 hit |
PIRSFi | PIRSF011443, YgjV, 1 hit |
i Sequence
Sequence statusi: Complete.
P42603-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MTAYWLAQGV GVIAFLIGIT TFFNRDERRF KKQLSVYSAV IGVHFFLLGT
60 70 80 90 100
YPAGASAILN AIRTLITLRT RSLWVMAIFI VLTGGIGLAK FHHPVELLPV
110 120 130 140 150
IGTIVSTWAL FCCKGLTMRC VMWFSTCCWV IHNFWAGSIG GTMIEGSFLL
160 170 180
MNGLNIIRFW RMQKRGIDPF KVEKTPSAVD ERG
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | D13328 Genomic DNA No translation available. U18997 Genomic DNA Translation: AAA57892.1 U00096 Genomic DNA Translation: AAC76125.1 AP009048 Genomic DNA Translation: BAE77140.1 |
PIRi | G65097 |
RefSeqi | NP_417561.1, NC_000913.3 WP_000128135.1, NZ_LN832404.1 |
Genome annotation databases
EnsemblBacteriai | AAC76125; AAC76125; b3090 BAE77140; BAE77140; BAE77140 |
GeneIDi | 947604 |
KEGGi | ecj:JW3061 eco:b3090 |
PATRICi | fig|1411691.4.peg.3639 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | D13328 Genomic DNA No translation available. U18997 Genomic DNA Translation: AAA57892.1 U00096 Genomic DNA Translation: AAC76125.1 AP009048 Genomic DNA Translation: BAE77140.1 |
PIRi | G65097 |
RefSeqi | NP_417561.1, NC_000913.3 WP_000128135.1, NZ_LN832404.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
BioGRIDi | 4262406, 11 interactors |
STRINGi | 511145.b3090 |
Protein family/group databases
TCDBi | 9.B.221.1.1, the 5 tms ygjv (ygjv) family |
Proteomic databases
PaxDbi | P42603 |
PRIDEi | P42603 |
Genome annotation databases
EnsemblBacteriai | AAC76125; AAC76125; b3090 BAE77140; BAE77140; BAE77140 |
GeneIDi | 947604 |
KEGGi | ecj:JW3061 eco:b3090 |
PATRICi | fig|1411691.4.peg.3639 |
Organism-specific databases
EchoBASEi | EB2591 |
Phylogenomic databases
eggNOGi | ENOG502ZBTK, Bacteria |
HOGENOMi | CLU_107941_0_0_6 |
Enzyme and pathway databases
BioCyci | EcoCyc:G7608-MONOMER |
Miscellaneous databases
PROi | PR:P42603 |
Family and domain databases
InterProi | View protein in InterPro IPR019629, Uncharacterised_HI1736/YgjV IPR026267, YgjV |
Pfami | View protein in Pfam PF10688, Imp-YgjV, 1 hit |
PIRSFi | PIRSF011443, YgjV, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YGJV_ECOLI | |
Accessioni | P42603Primary (citable) accession number: P42603 Secondary accession number(s): Q2M9B6 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 1, 1995 |
Last sequence update: | November 1, 1995 | |
Last modified: | October 7, 2020 | |
This is version 122 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |