UniProtKB - P42253 (YCBU_BACSU)
Protein
Uncharacterized aminotransferase YcbU
Gene
ycbU
Organism
Bacillus subtilis (strain 168)
Status
Functioni
Cofactori
pyridoxal 5'-phosphateBy similarity
GO - Molecular functioni
- transaminase activity Source: UniProtKB-KW
Keywordsi
Molecular function | Aminotransferase, Transferase |
Ligand | Pyridoxal phosphate |
Enzyme and pathway databases
BioCyci | BSUB:BSU02660-MONOMER |
Names & Taxonomyi
Protein namesi | |
Gene namesi | Name:ycbU Ordered Locus Names:BSU02660 |
Organismi | Bacillus subtilis (strain 168) |
Taxonomic identifieri | 224308 [NCBI] |
Taxonomic lineagei | Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000001305 | 1 – 370 | Uncharacterized aminotransferase YcbUAdd BLAST | 370 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Modified residuei | 207 | N6-(pyridoxal phosphate)lysineBy similarity | 1 |
Proteomic databases
PaxDbi | P42253 |
Family & Domainsi
Sequence similaritiesi
Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.Curated
Phylogenomic databases
eggNOGi | COG0520, Bacteria |
InParanoidi | P42253 |
OMAi | RVSPHIY |
PhylomeDBi | P42253 |
Family and domain databases
Gene3Di | 3.40.640.10, 1 hit 3.90.1150.10, 1 hit |
InterProi | View protein in InterPro IPR000192, Aminotrans_V_dom IPR020578, Aminotrans_V_PyrdxlP_BS IPR015424, PyrdxlP-dep_Trfase IPR015422, PyrdxlP-dep_Trfase_dom1 IPR015421, PyrdxlP-dep_Trfase_major |
Pfami | View protein in Pfam PF00266, Aminotran_5, 1 hit |
SUPFAMi | SSF53383, SSF53383, 1 hit |
PROSITEi | View protein in PROSITE PS00595, AA_TRANSFER_CLASS_5, 1 hit |
i Sequence
Sequence statusi: Complete.
P42253-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MEHLPEQYRQ LFPTLQTHTM LASCSQSALA EPVSRAIQDY YDSLLYKGTN
60 70 80 90 100
WKEAIEKTEF ARNEFAKLIG AEPDEVAIVP SVSDALVSVA SSLTAFGKKH
110 120 130 140 150
VVYTDMDFPA VPHVWQAHSD YTVSVIPSID GVLPLEQYET HISDETVLTC
160 170 180 190 200
VPHVHYRDGY VQDIKAIAEI SQRKGSLLFV DAYQSAGHIP IDVKEWGVDM
210 220 230 240 250
LAAGTRKYLL GIPGVAFLYV RKELADALKP KASAWFGRES GFDGAYAKVA
260 270 280 290 300
RRFQTGTPAF ISVYAAAAAL SLLNHIGVSH IRDHVKTICA DAVQYAAEKG
310 320 330 340 350
LQLAAAQGGI QPGMVAIRDE RASETAGLLK KKKVICAPRE NVIRLAPHFY
360 370
NTKEEMRHAI DEIAAKTIHK
Sequence cautioni
The sequence X66034 differs from that shown. Reason: Frameshift.Curated
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 92 | S → Y in BAA22227 (PubMed:9274031).Curated | 1 | |
Sequence conflicti | 92 | S → Y in D30808 (PubMed:7704254).Curated | 1 | |
Sequence conflicti | 133 | L → V in X66034 (PubMed:1353026).Curated | 1 | |
Sequence conflicti | 319 | D → I in D30808 (PubMed:7704254).Curated | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB000617 Genomic DNA Translation: BAA22227.1 AL009126 Genomic DNA Translation: CAB12060.2 D30808 Genomic DNA No translation available. X66034 Genomic DNA No translation available. |
PIRi | E69754 |
RefSeqi | NP_388148.2, NC_000964.3 WP_003246392.1, NZ_JNCM01000030.1 |
Genome annotation databases
EnsemblBacteriai | CAB12060; CAB12060; BSU_02660 |
GeneIDi | 938393 |
KEGGi | bsu:BSU02660 |
PATRICi | fig|224308.179.peg.276 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB000617 Genomic DNA Translation: BAA22227.1 AL009126 Genomic DNA Translation: CAB12060.2 D30808 Genomic DNA No translation available. X66034 Genomic DNA No translation available. |
PIRi | E69754 |
RefSeqi | NP_388148.2, NC_000964.3 WP_003246392.1, NZ_JNCM01000030.1 |
3D structure databases
SMRi | P42253 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 224308.BSU02660 |
Proteomic databases
PaxDbi | P42253 |
Genome annotation databases
EnsemblBacteriai | CAB12060; CAB12060; BSU_02660 |
GeneIDi | 938393 |
KEGGi | bsu:BSU02660 |
PATRICi | fig|224308.179.peg.276 |
Phylogenomic databases
eggNOGi | COG0520, Bacteria |
InParanoidi | P42253 |
OMAi | RVSPHIY |
PhylomeDBi | P42253 |
Enzyme and pathway databases
BioCyci | BSUB:BSU02660-MONOMER |
Family and domain databases
Gene3Di | 3.40.640.10, 1 hit 3.90.1150.10, 1 hit |
InterProi | View protein in InterPro IPR000192, Aminotrans_V_dom IPR020578, Aminotrans_V_PyrdxlP_BS IPR015424, PyrdxlP-dep_Trfase IPR015422, PyrdxlP-dep_Trfase_dom1 IPR015421, PyrdxlP-dep_Trfase_major |
Pfami | View protein in Pfam PF00266, Aminotran_5, 1 hit |
SUPFAMi | SSF53383, SSF53383, 1 hit |
PROSITEi | View protein in PROSITE PS00595, AA_TRANSFER_CLASS_5, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YCBU_BACSU | |
Accessioni | P42253Primary (citable) accession number: P42253 Secondary accession number(s): O34388 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 1, 1995 |
Last sequence update: | June 16, 2009 | |
Last modified: | April 7, 2021 | |
This is version 124 of the entry and version 3 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families