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Entry version 157 (29 Sep 2021)
Sequence version 2 (23 Nov 2004)
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Protein

Rabphilin-1

Gene

rbf-1

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Rab-3 effector.

1 Publication

<p>This subsection of the 'Function' section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

Ca2+PROSITE-ProRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the 'Description' field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi252Zinc 1PROSITE-ProRule annotation1
Metal bindingi255Zinc 1PROSITE-ProRule annotation1
Metal bindingi271Zinc 2PROSITE-ProRule annotation1
Metal bindingi274Zinc 2PROSITE-ProRule annotation1
Metal bindingi279Zinc 1PROSITE-ProRule annotation1
Metal bindingi283Zinc 1PROSITE-ProRule annotation1
Metal bindingi303Zinc 2PROSITE-ProRule annotation1
Metal bindingi306Zinc 2PROSITE-ProRule annotation1
Metal bindingi858Calcium 1PROSITE-ProRule annotation1
Metal bindingi858Calcium 2PROSITE-ProRule annotation1
Metal bindingi864Calcium 1PROSITE-ProRule annotation1
Metal bindingi919Calcium 1PROSITE-ProRule annotation1
Metal bindingi919Calcium 2PROSITE-ProRule annotation1
Metal bindingi921Calcium 1PROSITE-ProRule annotation1
Metal bindingi921Calcium 2PROSITE-ProRule annotation1
Metal bindingi926Calcium 2PROSITE-ProRule annotation1
Metal bindingi998Calcium 3PROSITE-ProRule annotation1
Metal bindingi998Calcium 4PROSITE-ProRule annotation1
Metal bindingi1004Calcium 3PROSITE-ProRule annotation1
Metal bindingi1058Calcium 3PROSITE-ProRule annotation1
Metal bindingi1058Calcium 4PROSITE-ProRule annotation1
Metal bindingi1060Calcium 3PROSITE-ProRule annotation1
Metal bindingi1060Calcium 4PROSITE-ProRule annotation1
Metal bindingi1066Calcium 4PROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri246 – 311FYVE-typePROSITE-ProRule annotationAdd BLAST66

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processExocytosis
LigandCalcium, Metal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Rabphilin-1
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:rbf-1
ORF Names:F37A4.7
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCaenorhabditis elegans
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri6239 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001940 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome III

Organism-specific databases

WormBase

More...
WormBasei
F37A4.7a ; CE29961 ; WBGene00004316 ; rbf-1
F37A4.7b ; CE29962 ; WBGene00004316 ; rbf-1
F37A4.7c ; CE29963 ; WBGene00004316 ; rbf-1
F37A4.7d ; CE30975 ; WBGene00004316 ; rbf-1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Cell junction, Synapse

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001902311 – 1106Rabphilin-1Add BLAST1106

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
P41885

PeptideAtlas

More...
PeptideAtlasi
P41885

PRoteomics IDEntifications database

More...
PRIDEi
P41885

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
P41885

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
WBGene00004316, Expressed in multi-cellular organism and 4 other tissues

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
41159, 1 interactor

Protein interaction database and analysis system

More...
IntActi
P41885, 1 interactor

STRING: functional protein association networks

More...
STRINGi
6239.F37A4.7d

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
P41885

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini198 – 324RabBDPROSITE-ProRule annotationAdd BLAST127
Domaini827 – 950C2 1PROSITE-ProRule annotationAdd BLAST124
Domaini967 – 1086C2 2PROSITE-ProRule annotationAdd BLAST120

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 56DisorderedSequence analysisAdd BLAST56
Regioni88 – 140DisorderedSequence analysisAdd BLAST53
Regioni187 – 206DisorderedSequence analysisAdd BLAST20
Regioni348 – 693DisorderedSequence analysisAdd BLAST346
Regioni720 – 763DisorderedSequence analysisAdd BLAST44
Regioni779 – 801DisorderedSequence analysisAdd BLAST23

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1 – 18Basic residuesSequence analysisAdd BLAST18
Compositional biasi34 – 51Polar residuesSequence analysisAdd BLAST18
Compositional biasi108 – 136Polar residuesSequence analysisAdd BLAST29
Compositional biasi367 – 430Polar residuesSequence analysisAdd BLAST64
Compositional biasi473 – 504Polar residuesSequence analysisAdd BLAST32
Compositional biasi518 – 547Basic and acidic residuesSequence analysisAdd BLAST30
Compositional biasi548 – 571Polar residuesSequence analysisAdd BLAST24
Compositional biasi580 – 620Polar residuesSequence analysisAdd BLAST41
Compositional biasi628 – 688Polar residuesSequence analysisAdd BLAST61
Compositional biasi720 – 738Polar residuesSequence analysisAdd BLAST19
Compositional biasi739 – 753Basic and acidic residuesSequence analysisAdd BLAST15
Compositional biasi779 – 800Polar residuesSequence analysisAdd BLAST22

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri246 – 311FYVE-typePROSITE-ProRule annotationAdd BLAST66

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1013, Eukaryota

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
P41885

Identification of Orthologs from Complete Genome Data

More...
OMAi
IICEDCR

Database of Orthologous Groups

More...
OrthoDBi
374694at2759

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.40.150, 2 hits
3.30.40.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR000008, C2_dom
IPR035892, C2_domain_sf
IPR041282, FYVE_2
IPR010911, Rab_BD
IPR043566, Rabphilin/DOC2/Noc2
IPR030541, RBF-1
IPR001565, Synaptotagmin
IPR017455, Znf_FYVE-rel
IPR011011, Znf_FYVE_PHD
IPR013083, Znf_RING/FYVE/PHD

The PANTHER Classification System

More...
PANTHERi
PTHR45729, PTHR45729, 1 hit
PTHR45729:SF6, PTHR45729:SF6, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00168, C2, 2 hits
PF02318, FYVE_2, 1 hit

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00360, C2DOMAIN
PR00399, SYNAPTOTAGMN

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00239, C2, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49562, SSF49562, 2 hits
SSF57903, SSF57903, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50004, C2, 2 hits
PS50916, RABBD, 1 hit
PS50178, ZF_FYVE, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (4)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 4 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform d (identifier: P41885-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MTKSTKLRHC KQKKKKPEKT PKGNPPILIT EKSIEDAATT TSTTDALLGS
60 70 80 90 100
PEGSRSKSRK LKLCCCTAQA ATLSPLDPTS YGGIASTSAH NGMVGGLSRD
110 120 130 140 150
SRAASRTSKR GSSKSLNRPQ IDADEPSTSG TNPDRRPSTH FVLDLPVVST
160 170 180 190 200
RYLMNDWEIG GTQNKWVCPS DRHLHLRAQL KSGWSVRTAT ARSPTNSKAQ
210 220 230 240 250
TGSITAAEQE HIQKVLAKAE ESKSKEQQRI GKMVDRLEKM RRRATGNGVT
260 270 280 290 300
HCLLCHTEFG LLASKSYAAM CVDCRKYVCQ RNCGVETTDV NQTTGKVETV
310 320 330 340 350
FLCKICSEAR EVLWKKSGAW FYKEMPEFQR PDDRLPYYVP VTTNGTLPNA
360 370 380 390 400
SSAATPLSGT PGGAGPQPMT MPSTSSCQMT TPKWASPGVC NSPGLQMNGG
410 420 430 440 450
PTSPLPNGTR RNTGHGGIEF PSSSRPSICS VLQAIEPLDR SKSPRPRIQP
460 470 480 490 500
RWVNEKVMSS MSVDDEEKAA SSSDGESFVQ SGVPRRALNN KTPVGSTSAT
510 520 530 540 550
TSPAPPPTST TPTSRREANM ERFSRHTHAH ANRLYSTDDD DDSSPESRPS
560 570 580 590 600
TRSTSPRHSL ATPSSYAHDT CHDTSLPDAD TRSIDSGVVQ SDHSNPQQSG
610 620 630 640 650
LTCSSSSLTP LQQQASHDHH SGGGTPRRIS NPDRTTSRVA QSASGTSLVT
660 670 680 690 700
PPPPISSRTS PDNCNSSPLN VMEHKSSSAS TASSGGNRRV GSAEPVLNNH
710 720 730 740 750
HAMHNNQNHN DINKKLISQT SRAESPLAAS SSFLSSPDDD TKQKNRRRDG
760 770 780 790 800
VGRVNSLQLR TSLDDVAPPV APISKMNGHI VSSEPTSSTT SNQNHTSVPI
810 820 830 840 850
PTVPVVPEEE EEKAITASTE SASEPGSLGS ITLTLTYHSA DKKLKMHLIR
860 870 880 890 900
AKNLKAMDSN GFSDPYVKFH LLPGNTKATK LTSKTIEKTL NPEWNEEMSY
910 920 930 940 950
YGITEDDKEK KILRVTVLDR DRIGSDFLGE TRIALKKLND NEMKKFNLYL
960 970 980 990 1000
ESALPVPQQT KEEENEDRGK INVGLQYNIQ QGSLFININR CVELVGMDST
1010 1020 1030 1040 1050
GFSDPYCKVS LTPITSKAHR AKTSTKKRTL NPEWNEQLQF VVPFKDLPKK
1060 1070 1080 1090 1100
TLQIGVYDHD LGKHDDYIGG ILLSTSAKDE RGRQWIKCIE NPGTLVEAWH

RLELDS
Length:1,106
Mass (Da):120,632
Last modified:November 23, 2004 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i34F1C9D9E3AF495F
GO
Isoform a (identifier: P41885-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-153: Missing.

Show »
Length:953
Mass (Da):104,337
Checksum:iB09A1922F53E61DF
GO
Isoform b (identifier: P41885-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-152: MTKSTKLRHC...LDLPVVSTRY → MFSRRTTPSP...LSGFLESKKD

Show »
Length:1,028
Mass (Da):112,341
Checksum:i3F37CE42F2B2C6CC
GO
Isoform c (identifier: P41885-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-152: MTKSTKLRHC...LDLPVVSTRY → MYMNREDH

Show »
Length:962
Mass (Da):105,528
Checksum:i62383C3DF98B388A
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0119081 – 153Missing in isoform a. 1 PublicationAdd BLAST153
Alternative sequenceiVSP_0119061 – 152MTKST…VSTRY → MFSRRTTPSPSITTASSSTF SISNLTNNNATSTSDLPASA ISNIVPQIPPTPRRVPPKIG LLRHLSGFLESKKD in isoform b. CuratedAdd BLAST152
Alternative sequenceiVSP_0119071 – 152MTKST…VSTRY → MYMNREDH in isoform c. CuratedAdd BLAST152

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF399852 mRNA Translation: AAK84870.1
FO081312 Genomic DNA Translation: CCD70705.1
FO081312 Genomic DNA Translation: CCD70706.1
FO081312 Genomic DNA Translation: CCD70707.1
FO081312 Genomic DNA Translation: CCD70708.1

Protein sequence database of the Protein Information Resource

More...
PIRi
S44644

NCBI Reference Sequences

More...
RefSeqi
NP_001022566.1, NM_001027395.3 [P41885-3]
NP_001022567.1, NM_001027396.3 [P41885-4]
NP_001022568.1, NM_001027397.2
NP_498467.3, NM_066066.5 [P41885-2]

Genome annotation databases

Ensembl metazoan genome annotation project

More...
EnsemblMetazoai
F37A4.7a.1; F37A4.7a.1; WBGene00004316 [P41885-2]
F37A4.7a.2; F37A4.7a.2; WBGene00004316 [P41885-2]
F37A4.7b.1; F37A4.7b.1; WBGene00004316 [P41885-3]
F37A4.7c.1; F37A4.7c.1; WBGene00004316 [P41885-4]
F37A4.7d.1; F37A4.7d.1; WBGene00004316 [P41885-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
175943

UCSC genome browser

More...
UCSCi
F37A4.7d, c. elegans [P41885-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF399852 mRNA Translation: AAK84870.1
FO081312 Genomic DNA Translation: CCD70705.1
FO081312 Genomic DNA Translation: CCD70706.1
FO081312 Genomic DNA Translation: CCD70707.1
FO081312 Genomic DNA Translation: CCD70708.1
PIRiS44644
RefSeqiNP_001022566.1, NM_001027395.3 [P41885-3]
NP_001022567.1, NM_001027396.3 [P41885-4]
NP_001022568.1, NM_001027397.2
NP_498467.3, NM_066066.5 [P41885-2]

3D structure databases

SMRiP41885
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi41159, 1 interactor
IntActiP41885, 1 interactor
STRINGi6239.F37A4.7d

PTM databases

iPTMnetiP41885

Proteomic databases

PaxDbiP41885
PeptideAtlasiP41885
PRIDEiP41885

Genome annotation databases

EnsemblMetazoaiF37A4.7a.1; F37A4.7a.1; WBGene00004316 [P41885-2]
F37A4.7a.2; F37A4.7a.2; WBGene00004316 [P41885-2]
F37A4.7b.1; F37A4.7b.1; WBGene00004316 [P41885-3]
F37A4.7c.1; F37A4.7c.1; WBGene00004316 [P41885-4]
F37A4.7d.1; F37A4.7d.1; WBGene00004316 [P41885-1]
GeneIDi175943
UCSCiF37A4.7d, c. elegans [P41885-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
175943
WormBaseiF37A4.7a ; CE29961 ; WBGene00004316 ; rbf-1
F37A4.7b ; CE29962 ; WBGene00004316 ; rbf-1
F37A4.7c ; CE29963 ; WBGene00004316 ; rbf-1
F37A4.7d ; CE30975 ; WBGene00004316 ; rbf-1

Phylogenomic databases

eggNOGiKOG1013, Eukaryota
InParanoidiP41885
OMAiIICEDCR
OrthoDBi374694at2759

Miscellaneous databases

Protein Ontology

More...
PROi
PR:P41885

Gene expression databases

BgeeiWBGene00004316, Expressed in multi-cellular organism and 4 other tissues

Family and domain databases

Gene3Di2.60.40.150, 2 hits
3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR000008, C2_dom
IPR035892, C2_domain_sf
IPR041282, FYVE_2
IPR010911, Rab_BD
IPR043566, Rabphilin/DOC2/Noc2
IPR030541, RBF-1
IPR001565, Synaptotagmin
IPR017455, Znf_FYVE-rel
IPR011011, Znf_FYVE_PHD
IPR013083, Znf_RING/FYVE/PHD
PANTHERiPTHR45729, PTHR45729, 1 hit
PTHR45729:SF6, PTHR45729:SF6, 1 hit
PfamiView protein in Pfam
PF00168, C2, 2 hits
PF02318, FYVE_2, 1 hit
PRINTSiPR00360, C2DOMAIN
PR00399, SYNAPTOTAGMN
SMARTiView protein in SMART
SM00239, C2, 2 hits
SUPFAMiSSF49562, SSF49562, 2 hits
SSF57903, SSF57903, 1 hit
PROSITEiView protein in PROSITE
PS50004, C2, 2 hits
PS50916, RABBD, 1 hit
PS50178, ZF_FYVE, 1 hit

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiRBF1_CAEEL
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P41885
Secondary accession number(s): Q8MQ57
, Q8WT49, Q8WT50, Q962V6
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1995
Last sequence update: November 23, 2004
Last modified: September 29, 2021
This is version 157 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
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