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Protein

Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic

Gene

LFNR1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

May play a key role in regulating the relative amounts of cyclic and non-cyclic electron flow to meet the demands of the plant for ATP and reducing power.By similarity

Catalytic activityi

2 reduced ferredoxin + NADP+ + H+ = 2 oxidized ferredoxin + NADPH.By similarity

Cofactori

Pathwayi: photosynthesis

This protein is involved in the pathway photosynthesis, which is part of Energy metabolism.By similarity
View all proteins of this organism that are known to be involved in the pathway photosynthesis and in Energy metabolism.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei144NADPBy similarity1
Binding sitei164NADPBy similarity1
Binding sitei168FADBy similarity1
Binding sitei220FADBy similarity1
Binding sitei220NADP; via amide nitrogenBy similarity1
Binding sitei292NADPBy similarity1
Binding sitei360NADPBy similarity1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi141 – 144FADBy similarity4
Nucleotide bindingi162 – 164FADBy similarity3
Nucleotide bindingi179 – 181FADBy similarity3
Nucleotide bindingi252 – 253NADPBy similarity2
Nucleotide bindingi282 – 283NADPBy similarity2
Nucleotide bindingi321 – 322NADPBy similarity2

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductase
Biological processElectron transport, Photosynthesis, Transport
LigandFAD, Flavoprotein, NADP

Enzyme and pathway databases

BRENDAi1.18.1.2 8948
UniPathwayi
UPA00091

Names & Taxonomyi

Protein namesi
Recommended name:
Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic (EC:1.18.1.2By similarity)
Short name:
FNR
Alternative name(s):
Leaf FNR 11 Publication
Short name:
FNR-11 Publication
Short name:
Os-LFNR11 Publication
Gene namesi
Name:LFNR11 Publication
Ordered Locus Names:Os06g0107700Curated, LOC_Os06g01850Curated
ORF Names:OsJ_19844Imported, P0514G12.8, P0644B06.52
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 6

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Membrane, Plastid, Thylakoid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 62ChloroplastSequence analysisAdd BLAST62
ChainiPRO_000001940963 – 362Ferredoxin--NADP reductase, leaf isozyme 1, chloroplasticAdd BLAST300

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi180 ↔ 185By similarity
Modified residuei181PhosphoserineBy similarity1

Post-translational modificationi

May form interchain disulfide bonds with LIR1.1 Publication

Keywords - PTMi

Disulfide bond, Phosphoprotein

Proteomic databases

PaxDbiP41344
PRIDEiP41344

Expressioni

Gene expression databases

ExpressionAtlasiP41344 differential
GenevisibleiP41344 OS

Interactioni

Subunit structurei

Component of high molecular weight thylakoid LFNRs-containing protein complexes containing LIR1, LFNR1, LFNR2, TIC62 and TROL proteins. Interacts directly with LIR1 and TIC62; LIR1 increases the affinity of LFNR1 and LFNR2 for TIC62.1 Publication

Protein-protein interaction databases

STRINGi39947.LOC_Os06g01850.1

Structurei

3D structure databases

ProteinModelPortaliP41344
SMRiP41344
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini83 – 205FAD-binding FR-typePROSITE-ProRule annotationAdd BLAST123

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG1158 Eukaryota
COG0369 LUCA
HOGENOMiHOG000220125
InParanoidiP41344
KOiK02641
OMAiVNCEKND
OrthoDBiEOG09360EAZ

Family and domain databases

Gene3Di3.40.50.80, 1 hit
InterProiView protein in InterPro
IPR008333 Cbr1-like_FAD-bd_dom
IPR017927 FAD-bd_FR_type
IPR001709 Flavoprot_Pyr_Nucl_cyt_Rdtase
IPR015701 FNR
IPR039261 FNR_nucleotide-bd
IPR035442 FNR_plant_Cyanobacteria
IPR001433 OxRdtase_FAD/NAD-bd
IPR017938 Riboflavin_synthase-like_b-brl
PfamiView protein in Pfam
PF00970 FAD_binding_6, 1 hit
PF00175 NAD_binding_1, 1 hit
PIRSFiPIRSF501178 FNR-PetH, 1 hit
PIRSF000361 Frd-NADP+_RD, 1 hit
PRINTSiPR00371 FPNCR
SUPFAMiSSF52343 SSF52343, 1 hit
SSF63380 SSF63380, 1 hit
PROSITEiView protein in PROSITE
PS51384 FAD_FR, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P41344-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAAVTAAAVS TSAAAAVTKA SPSPAHCFLP CPPRTRAAHQ RGLLLRAQVS
60 70 80 90 100
TTDAAAVAAA PAKKEKISKK HDEGVVTNKY RPKEPYVGKC LLNTKITADD
110 120 130 140 150
APGETWHMVF STEGEIPYRE GQSIGVIADG VDKNGKPHKL RLYSIASSAL
160 170 180 190 200
GDFGDSKTVS LCVKRLVYTN DQGEIVKGVC SNFLCDLKPG SDVKITGPVG
210 220 230 240 250
KEMLMPKDPN ANIIMLATGT GIAPFRSFLW KMFFEKYDDY KFNGLAWLFL
260 270 280 290 300
GVPTSSSLLY KEEFDKMKAK APENFRVDYA VSREQTNAQG EKMYIQTRMA
310 320 330 340 350
EYKEELWELL KKDHTYVYMC GLKGMEKGID DIMVSLAAKD GIDWADYKKQ
360
LKKGEQWNVE VY
Length:362
Mass (Da):40,008
Last modified:February 1, 1995 - v1
Checksum:i1B6034A8A76E4F29
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D17790 mRNA Translation: BAA04616.1
AP000616 Genomic DNA Translation: BAA85425.1
AP001129 Genomic DNA Translation: BAA90642.1
AP008212 Genomic DNA Translation: BAF18484.1
AP014962 Genomic DNA Translation: BAS95764.1
CM000143 Genomic DNA Translation: EAZ35558.1
AK065063 mRNA Translation: BAG89346.1
PIRiT04349
RefSeqiXP_015640980.1, XM_015785494.1
UniGeneiOs.10696

Genome annotation databases

EnsemblPlantsiOs06t0107700-01; Os06t0107700-01; Os06g0107700
GeneIDi4339874
GrameneiOs06t0107700-01; Os06t0107700-01; Os06g0107700
KEGGiosa:4339874

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D17790 mRNA Translation: BAA04616.1
AP000616 Genomic DNA Translation: BAA85425.1
AP001129 Genomic DNA Translation: BAA90642.1
AP008212 Genomic DNA Translation: BAF18484.1
AP014962 Genomic DNA Translation: BAS95764.1
CM000143 Genomic DNA Translation: EAZ35558.1
AK065063 mRNA Translation: BAG89346.1
PIRiT04349
RefSeqiXP_015640980.1, XM_015785494.1
UniGeneiOs.10696

3D structure databases

ProteinModelPortaliP41344
SMRiP41344
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os06g01850.1

Proteomic databases

PaxDbiP41344
PRIDEiP41344

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOs06t0107700-01; Os06t0107700-01; Os06g0107700
GeneIDi4339874
GrameneiOs06t0107700-01; Os06t0107700-01; Os06g0107700
KEGGiosa:4339874

Phylogenomic databases

eggNOGiKOG1158 Eukaryota
COG0369 LUCA
HOGENOMiHOG000220125
InParanoidiP41344
KOiK02641
OMAiVNCEKND
OrthoDBiEOG09360EAZ

Enzyme and pathway databases

UniPathwayi
UPA00091

BRENDAi1.18.1.2 8948

Gene expression databases

ExpressionAtlasiP41344 differential
GenevisibleiP41344 OS

Family and domain databases

Gene3Di3.40.50.80, 1 hit
InterProiView protein in InterPro
IPR008333 Cbr1-like_FAD-bd_dom
IPR017927 FAD-bd_FR_type
IPR001709 Flavoprot_Pyr_Nucl_cyt_Rdtase
IPR015701 FNR
IPR039261 FNR_nucleotide-bd
IPR035442 FNR_plant_Cyanobacteria
IPR001433 OxRdtase_FAD/NAD-bd
IPR017938 Riboflavin_synthase-like_b-brl
PfamiView protein in Pfam
PF00970 FAD_binding_6, 1 hit
PF00175 NAD_binding_1, 1 hit
PIRSFiPIRSF501178 FNR-PetH, 1 hit
PIRSF000361 Frd-NADP+_RD, 1 hit
PRINTSiPR00371 FPNCR
SUPFAMiSSF52343 SSF52343, 1 hit
SSF63380 SSF63380, 1 hit
PROSITEiView protein in PROSITE
PS51384 FAD_FR, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiFENR1_ORYSJ
AccessioniPrimary (citable) accession number: P41344
Secondary accession number(s): Q0DF89, Q7F8E8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: October 10, 2018
This is version 130 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. PATHWAY comments
    Index of metabolic and biosynthesis pathways
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Main funding by: National Institutes of Health

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