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Protein

Uncharacterized HTH-type transcriptional regulator YwbI

Gene

ywbI

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi18 – 37H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciBSUB:BSU38310-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YwbI
Gene namesi
Name:ywbI
Ordered Locus Names:BSU38310
ORF Names:ipa-24d
OrganismiBacillus subtilis (strain 168)
Taxonomic identifieri224308 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000001570 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001058231 – 301Uncharacterized HTH-type transcriptional regulator YwbIAdd BLAST301

Proteomic databases

PaxDbiP39592
PRIDEiP39592

Interactioni

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100020681

Structurei

3D structure databases

ProteinModelPortaliP39592
SMRiP39592
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 58HTH lysR-typePROSITE-ProRule annotationAdd BLAST58

Phylogenomic databases

eggNOGiENOG4105CMU Bacteria
ENOG410XNYY LUCA
HOGENOMiHOG000233514
InParanoidiP39592
OMAiKDGYGMQ
PhylomeDBiP39592

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
PRINTSiPR00039 HTHLYSR
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

P39592-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDIRHLTYFL EVARLKSFTK ASQSLYVSQP TISKMIKNLE EELGIELFYR
60 70 80 90 100
NGRQVELTDA GHSMYVQAQE IIKSFQNLTS ELNDIMEVKK GHVRIGLPPM
110 120 130 140 150
IGSGFFPRVL GDFRENYPNV TFQLVEDGSI KVQEGVGDGS LDIGVVVLPA
160 170 180 190 200
NEDIFHSFTI VKETLMLVVH PSHRLADEKE CQLRELKDEP FIFFREDFVL
210 220 230 240 250
HNRIMTECIK AGFRPHIIYE TSQWDFISEM VSANLGIGLL PERICRGLDP
260 270 280 290 300
EKVKVIPLVD PVIPWHLAII WRKDRYLSFA ARAWLEHTKS YLWDPKKDSK

G
Length:301
Mass (Da):34,677
Last modified:February 1, 1995 - v1
Checksum:i63B06C0A7D3D30B9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X73124 Genomic DNA Translation: CAA51580.1
AL009126 Genomic DNA Translation: CAB15857.1
PIRiS39679
RefSeqiNP_391710.1, NC_000964.3
WP_003227377.1, NZ_JNCM01000034.1

Genome annotation databases

EnsemblBacteriaiCAB15857; CAB15857; BSU38310
GeneIDi937626
KEGGibsu:BSU38310
PATRICifig|224308.179.peg.4147

Similar proteinsi

Entry informationi

Entry nameiYWBI_BACSU
AccessioniPrimary (citable) accession number: P39592
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: February 1, 1995
Last modified: May 23, 2018
This is version 119 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList

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