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UniProtKB - P39332 (YJGH_ECOLI)
Protein
RutC family protein YjgH
Gene
yjgH
Organism
Escherichia coli (strain K12)
Status
Names & Taxonomyi
Protein namesi | Recommended name: RutC family protein YjgH |
Gene namesi | Name:yjgH Ordered Locus Names:b4248, JW4206 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000170325 | 1 – 131 | RutC family protein YjgHAdd BLAST | 131 |
Proteomic databases
jPOSTi | P39332 |
PaxDbi | P39332 |
PRIDEi | P39332 |
Interactioni
Binary interactionsi
P39332
With | #Exp. | IntAct |
---|---|---|
pta [P0A9M8] | 2 | EBI-561380,EBI-555015 |
Protein-protein interaction databases
BioGRIDi | 4262944, 22 interactors |
DIPi | DIP-12603N |
IntActi | P39332, 1 interactor |
STRINGi | 511145.b4248 |
Structurei
Secondary structure
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details3D structure databases
SMRi | P39332 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | P39332 |
Family & Domainsi
Sequence similaritiesi
Belongs to the RutC family.Curated
Phylogenomic databases
eggNOGi | COG0251, Bacteria |
HOGENOMi | CLU_100715_4_1_6 |
InParanoidi | P39332 |
PhylomeDBi | P39332 |
Family and domain databases
CDDi | cd02198, YjgH_like, 1 hit |
Gene3Di | 3.30.1330.40, 1 hit |
InterProi | View protein in InterPro IPR035959, RutC-like_sf IPR006175, YjgF/YER057c/UK114 IPR038743, YjgH-like |
PANTHERi | PTHR11803, PTHR11803, 1 hit |
Pfami | View protein in Pfam PF01042, Ribonuc_L-PSP, 1 hit |
SUPFAMi | SSF55298, SSF55298, 1 hit |
i Sequence
Sequence statusi: Complete.
P39332-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MVERTAVFPA GRHSLYAEHR YSAAIRSGDL LFVSGQVGSR EDGTPEPDFQ
60 70 80 90 100
QQVRLAFDNL HATLAAAGCT FDDIIDVTSF HTDPENQFED IMTVKNEIFS
110 120 130
APPYPNWTAV GVTWLAGFDF EIKVIARIPE Q
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U14003 Genomic DNA Translation: AAA97145.1 U00096 Genomic DNA Translation: AAC77205.1 AP009048 Genomic DNA Translation: BAE78246.1 |
PIRi | S56474 |
RefSeqi | NP_418669.1, NC_000913.3 WP_000230281.1, NZ_STEB01000013.1 |
Genome annotation databases
EnsemblBacteriai | AAC77205; AAC77205; b4248 BAE78246; BAE78246; BAE78246 |
GeneIDi | 66671834 948769 |
KEGGi | ecj:JW4206 eco:b4248 |
PATRICi | fig|511145.12.peg.4379 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U14003 Genomic DNA Translation: AAA97145.1 U00096 Genomic DNA Translation: AAC77205.1 AP009048 Genomic DNA Translation: BAE78246.1 |
PIRi | S56474 |
RefSeqi | NP_418669.1, NC_000913.3 WP_000230281.1, NZ_STEB01000013.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1PF5 | X-ray | 2.50 | A | 1-131 | [»] | |
SMRi | P39332 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
BioGRIDi | 4262944, 22 interactors |
DIPi | DIP-12603N |
IntActi | P39332, 1 interactor |
STRINGi | 511145.b4248 |
Proteomic databases
jPOSTi | P39332 |
PaxDbi | P39332 |
PRIDEi | P39332 |
Genome annotation databases
EnsemblBacteriai | AAC77205; AAC77205; b4248 BAE78246; BAE78246; BAE78246 |
GeneIDi | 66671834 948769 |
KEGGi | ecj:JW4206 eco:b4248 |
PATRICi | fig|511145.12.peg.4379 |
Organism-specific databases
EchoBASEi | EB2417 |
Phylogenomic databases
eggNOGi | COG0251, Bacteria |
HOGENOMi | CLU_100715_4_1_6 |
InParanoidi | P39332 |
PhylomeDBi | P39332 |
Enzyme and pathway databases
BioCyci | EcoCyc:G7879-MONOMER |
Miscellaneous databases
EvolutionaryTracei | P39332 |
PROi | PR:P39332 |
Family and domain databases
CDDi | cd02198, YjgH_like, 1 hit |
Gene3Di | 3.30.1330.40, 1 hit |
InterProi | View protein in InterPro IPR035959, RutC-like_sf IPR006175, YjgF/YER057c/UK114 IPR038743, YjgH-like |
PANTHERi | PTHR11803, PTHR11803, 1 hit |
Pfami | View protein in Pfam PF01042, Ribonuc_L-PSP, 1 hit |
SUPFAMi | SSF55298, SSF55298, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | YJGH_ECOLI | |
Accessioni | P39332Primary (citable) accession number: P39332 Secondary accession number(s): Q2M660 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | February 1, 1995 |
Last sequence update: | February 1, 1995 | |
Last modified: | February 23, 2022 | |
This is version 145 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
3D-structure, Reference proteomeDocuments
- PDB cross-references
Index of Protein Data Bank (PDB) cross-references - SIMILARITY comments
Index of protein domains and families