COIL

Functionⁱ

Component of nuclear coiled bodies, also known as Cajal bodies or CBs, which are involved in the modification and assembly of nucleoplasmic snRNPs.1 Publication

GO - Molecular functionⁱ

identical protein binding
Source: IntAct
Inferred from physical interactionⁱ
- 16713569
protein C-terminus binding
Source: UniProtKB
Inferred from physical interactionⁱ
- 12757932

View the complete GO annotation on QuickGO ...

Enzyme and pathway databases

SIGNORⁱ	P38432

SIGNORⁱ

P38432

Names & Taxonomyⁱ

Protein namesⁱ	Recommended name: Coilin Alternative name(s): p80-coilin
Gene namesⁱ	Name:COIL Synonyms:CLN80
Organismⁱ	Homo sapiens (Human)
Taxonomic identifierⁱ	9606 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo
Proteomesⁱ	UP000005640 Componentⁱ: Chromosome 17

Organism-specific databases

EuPathDBⁱ	HostDB:ENSG00000121058.4
Human Gene Nomenclature Database More...HGNCⁱ	HGNC:2184 COIL
MIMⁱ	600272 gene
neXtProtⁱ	NX_P38432

Keywords - Cellular componentⁱ

Nucleus

Pathology & Biotechⁱ

Mutagenesis

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Mutagenesisⁱ	413 – 419	RGRGRGR → GGGGGGG: Impaired interaction with SMN. 1 Publication		7

Organism-specific databases

DisGeNET More...DisGeNETⁱ	8161
Open Targets More...OpenTargetsⁱ	ENSG00000121058
PharmGKBⁱ	PA26700

Polymorphism and mutation databases

BioMutaⁱ	COIL
DMDMⁱ	585632

PTM / Processingⁱ

Molecule processing

Feature key	Position(s)	DescriptionActions	Graphical view	Length
ChainⁱPRO_0000058146	1 – 576	CoilinAdd BLAST		576

Amino acid modifications

Feature key	Position(s)	DescriptionActions	Length
Modified residueⁱ	105	PhosphoserineCombined sources	1
Modified residueⁱ	122	PhosphothreonineCombined sources	1
Cross-linkⁱ	127	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources
Cross-linkⁱ	151	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources
Cross-linkⁱ	160	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources
Modified residueⁱ	184	Phosphoserine; by VRK1 and VRK21 Publication	1
Cross-linkⁱ	204	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources
Cross-linkⁱ	209	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources
Modified residueⁱ	248	PhosphoserineBy similarity	1
Modified residueⁱ	250	PhosphoserineBy similarity	1
Modified residueⁱ	256	PhosphoserineBy similarity	1
Modified residueⁱ	271	PhosphoserineCombined sources	1
Modified residueⁱ	272	PhosphoserineCombined sources	1
Cross-linkⁱ	274	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources
Cross-linkⁱ	281	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources
Modified residueⁱ	290	PhosphothreonineCombined sources	1
Cross-linkⁱ	293	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources
Cross-linkⁱ	297	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources
Modified residueⁱ	301	PhosphoserineCombined sources	1
Modified residueⁱ	303	PhosphothreonineCombined sources	1
Modified residueⁱ	403	PhosphoserineCombined sources	1
Cross-linkⁱ	444	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources
Modified residueⁱ	456	PhosphothreonineCombined sources	1
Modified residueⁱ	487	PhosphoserineCombined sources	1
Modified residueⁱ	489	PhosphoserineCombined sources	1
Cross-linkⁱ	496	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)Combined sources
Modified residueⁱ	566	PhosphoserineCombined sources	1

Post-translational modificationⁱ

Symmetrical dimethylation of arginine residues within the RG repeat region enhances affinity for SMN, and thus localization of SMN complexes to CBs.

Phosphorylation during mitosis is associated with disassembly of CBs.2 Publications

Keywords - PTMⁱ

Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

EPDⁱ	P38432
MaxQB - The MaxQuant DataBase More...MaxQBⁱ	P38432
PaxDbⁱ	P38432
PeptideAtlas More...PeptideAtlasⁱ	P38432
PRIDEⁱ	P38432
ProteomicsDBⁱ	55295

PTM databases

iPTMnetⁱ	P38432
PhosphoSitePlusⁱ	P38432
SwissPalmⁱ	P38432

Expressionⁱ

Tissue specificityⁱ

Found in all the cell types examined.

Gene expression databases

Bgeeⁱ	ENSG00000121058 Expressed in 232 organ(s), highest expression level in sperm
CleanExⁱ	HS_COIL
ExpressionAtlasⁱ	P38432 baseline and differential
Genevisibleⁱ	P38432 HS

Organism-specific databases

Human Protein Atlas More...HPAⁱ	CAB017524 CAB069400 HPA027885 HPA068537

HPAⁱ

CAB017524
CAB069400
HPA027885
HPA068537

Interactionⁱ

Subunit structureⁱ

Interacts with ANKS1B (PubMed:15862129). Interacts with SMN1 (via Tudor domain) (PubMed:11641277). Interacts (via C-terminus) with AK6 (PubMed:16079131). Interacts with WRAP53/TCAB1 (PubMed:21072240). Interacts with HMBOX1 (PubMed:23685356). Interacts with PSME3; the interaction is inhibited by FAM192A (PubMed:29934401).6 Publications

Binary interactionsⁱ

With	Entry	#Exp.	IntAct
itself		3	EBI-945751,EBI-945751
AK6	Q9Y3D8	5	EBI-945751,EBI-2896123
ARMCX1	Q9P291	3	EBI-945751,EBI-2843626
ATXN1	P54253	3	EBI-945751,EBI-930964
ATXN1	P54253-1	6	EBI-945751,EBI-930975
BYSL	Q13895	10	EBI-945751,EBI-358049
CDC23	Q9UJX2	3	EBI-945751,EBI-396137
CEP70	Q8NHQ1	3	EBI-945751,EBI-739624
DRG1	Q9Y295	3	EBI-945751,EBI-719554
FGF12	P61328	3	EBI-945751,EBI-6657662
LNX1	Q8TBB1	2	EBI-945751,EBI-739832
MFAP1	P55081	3	EBI-945751,EBI-1048159
PDE4D	Q08499	3	EBI-945751,EBI-1642831
PDLIM5	Q96HC4	3	EBI-945751,EBI-751267
PICK1	Q9NRD5	3	EBI-945751,EBI-79165
POLR2L	P62875	3	EBI-945751,EBI-359527
PSME3	P61289	5	EBI-945751,EBI-355546
PTS	Q03393	3	EBI-945751,EBI-712344
SMN2	Q16637	4	EBI-945751,EBI-395421
SNRPF	P62306	5	EBI-945751,EBI-356900
VRK1	Q99986	9	EBI-945751,EBI-1769146
WDR34	Q96EX3	3	EBI-945751,EBI-2556091
WDYHV1	Q96HA8	3	EBI-945751,EBI-741158
WRAP53	Q9BUR4	4	EBI-945751,EBI-2563542
XRCC5	P13010	6	EBI-945751,EBI-357997
XRCC6	P12956	3	EBI-945751,EBI-353208
ZCCHC10	Q8TBK6	3	EBI-945751,EBI-597063
ZNF277	Q8WWA6	3	EBI-945751,EBI-10192794

GO - Molecular functionⁱ

identical protein binding
Source: IntAct
Inferred from physical interactionⁱ
- 16713569
protein C-terminus binding
Source: UniProtKB
Inferred from physical interactionⁱ
- 12757932

View the complete GO annotation on QuickGO ...

Protein-protein interaction databases

BioGridⁱ	113815, 102 interactors
CORUMⁱ	P38432
Database of interacting proteins More...DIPⁱ	DIP-38503N
IntActⁱ	P38432, 100 interactors
Molecular INTeraction database More...MINTⁱ	P38432
STRINGⁱ	9606.ENSP00000240316

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	P38432
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Length
Repeatⁱ	223 – 226	1-1	4
Repeatⁱ	268 – 271	1-2	4
Repeatⁱ	386 – 389	2-1	4
Repeatⁱ	413 – 414	3-1	2
Repeatⁱ	415 – 416	3-2	2
Repeatⁱ	417 – 418	3-3	2
Repeatⁱ	419 – 420	3-4	2
Domainⁱ	460 – 559	Tudor; atypicalAdd BLAST	100
Repeatⁱ	517 – 520	2-2	4

Region

Feature key	Position(s)	DescriptionActions	Length
Regionⁱ	223 – 271	2 X 4 AA repeats of A-R-N-SAdd BLAST	49
Regionⁱ	386 – 520	2 X 4 AA repeats of S-L-P-AAdd BLAST	135
Regionⁱ	392 – 420	Required for interaction with SMN1 PublicationAdd BLAST	29
Regionⁱ	413 – 420	4 X 2 AA tandem repeats of R-G	8

Compositional bias

Feature key	Position(s)	DescriptionActions	Length
Compositional biasⁱ	181 – 201	Lys-rich (basic)Add BLAST	21
Compositional biasⁱ	243 – 252	Ser/Thr-rich	10
Compositional biasⁱ	310 – 320	Ser/Thr-richAdd BLAST	11

Domainⁱ

The atypical Tudor domain at the C-terminus contains two large unstructured loops, and does not bind methylated residues.1 Publication

Sequence similaritiesⁱ

Belongs to the coilin family.Curated

Keywords - Domainⁱ

Repeat

Phylogenomic databases

eggNOGⁱ	ENOG410IHAK Eukaryota ENOG41121C6 LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00390000004832
HOGENOMⁱ	HOG000059586
HOVERGENⁱ	HBG007989
InParanoidⁱ	P38432
KEGG Orthology (KO) More...KOⁱ	K13150
OMAⁱ	HCTVFWL
Database of Orthologous Groups More...OrthoDBⁱ	EOG091G0B3V
PhylomeDBⁱ	P38432
TreeFamⁱ	TF331811

Family and domain databases

InterProⁱ	View protein in InterPro IPR024822 Coilin IPR031722 Coilin_N
PANTHERⁱ	PTHR15197 PTHR15197, 1 hit
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF15862 Coilin_N, 1 hit

Sequence (1+)ⁱ

Sequence statusⁱ: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show all Align All

P38432-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MAASETVRLR LQFDYPPPAT PHCTAFWLLV DLNRCRVVTD LISLIRQRFG 
        60         70         80         90        100
FSSGAFLGLY LEGGLLPPAE SARLVRDNDC LRVKLEERGV AENSVVISNG 
       110        120        130        140        150
DINLSLRKAK KRAFQLEEGE ETEPDCKYSK KHWKSRENNN NNEKVLDLEP 
       160        170        180        190        200
KAVTDQTVSK KNKRKNKATC GTVGDDNEEA KRKSPKKKEK CEYKKKAKNP 
       210        220        230        240        250
KSPKVQAVKD WANQRCSSPK GSARNSLVKA KRKGSVSVCS KESPSSSSES 
       260        270        280        290        300
ESCDESISDG PSKVTLEARN SSEKLPTELS KEEPSTKNTT ADKLAIKLGF 
       310        320        330        340        350
SLTPSKGKTS GTTSSSSDSS AESDDQCLMS SSTPECAAGF LKTVGLFAGR 
       360        370        380        390        400
GRPGPGLSSQ TAGAAGWRRS GSNGGGQAPG ASPSVSLPAS LGRGWGREEN 
       410        420        430        440        450
LFSWKGAKGR GMRGRGRGRG HPVSCVVNRS TDNQRQQQLN DVVKNSSTII 
       460        470        480        490        500
QNPVETPKKD YSLLPLLAAA PQVGEKIAFK LLELTSSYSP DVSDYKEGRI 
       510        520        530        540        550
LSHNPETQQV DIEILSSLPA LREPGKFDLV YHNENGAEVV EYAVTQESKI 
       560        570 
TVFWKELIDP RLIIESPSNT SSTEPA

Length:576

Mass (Da):62,608

Last modified:October 1, 1994 - v1

Checksum:ⁱ879702B590F16849

GO

Computationally mapped potential isoform sequencesⁱ

There is 1 potential isoform mapped to this entry.BLAST Align Show all Add to basket

	Entry	Entry name		Protein names	Gene names	Length	Annotation

	I3L369	I3L369_HUMAN		Coilin Coilin	COIL	37	Annotation score:

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	M58411 mRNA Translation: AAA36412.1 AK313616 mRNA Translation: BAG36378.1 AC004584 Genomic DNA No translation available. CH471109 Genomic DNA Translation: EAW94522.1 BC010385 mRNA Translation: AAH10385.1 U06632 mRNA Translation: AAB81550.1
The Consensus CDS (CCDS) project More...CCDSⁱ	CCDS11592.1
PIRⁱ	S50113
NCBI Reference Sequences More...RefSeqⁱ	NP_004636.1, NM_004645.2
UniGeneⁱ	Hs.532795

Genome annotation databases

Ensemblⁱ	ENST00000240316; ENSP00000240316; ENSG00000121058
GeneIDⁱ	8161
KEGGⁱ	hsa:8161
UCSC genome browser More...UCSCⁱ	uc002iuu.4 human

Similar proteinsⁱ

90% Identity
50% Identity

Protein	Similar proteins		Species	Score	Length	Source
P38432	COIL isoform 1		PANTR		576	UniRef90_P38432
Uncharacterized protein		NOMLE		576
COIL isoform 1		PONAB		576
Uncharacterized protein		RHIRO		576
Uncharacterized protein		RHIBE		576
+17

Protein	Similar proteins		Species	Score	Length	Source
P38432	Coilin		MOUSE		570	UniRef50_P38432
COIL isoform 1		PONAB		576
Uncharacterized protein		RHIRO		576
Uncharacterized protein		RHIBE		576
Uncharacterized protein		NOMLE		576
+119

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	M58411 mRNA Translation: AAA36412.1 AK313616 mRNA Translation: BAG36378.1 AC004584 Genomic DNA No translation available. CH471109 Genomic DNA Translation: EAW94522.1 BC010385 mRNA Translation: AAH10385.1 U06632 mRNA Translation: AAB81550.1
CCDSⁱ	CCDS11592.1
PIRⁱ	S50113
RefSeqⁱ	NP_004636.1, NM_004645.2
UniGeneⁱ	Hs.532795

3D structure databases

ProteinModelPortalⁱ	P38432
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

BioGridⁱ	113815, 102 interactors
CORUMⁱ	P38432
DIPⁱ	DIP-38503N
IntActⁱ	P38432, 100 interactors
MINTⁱ	P38432
STRINGⁱ	9606.ENSP00000240316

PTM databases

iPTMnetⁱ	P38432
PhosphoSitePlusⁱ	P38432
SwissPalmⁱ	P38432

Polymorphism and mutation databases

BioMutaⁱ	COIL
DMDMⁱ	585632

Proteomic databases

EPDⁱ	P38432
MaxQBⁱ	P38432
PaxDbⁱ	P38432
PeptideAtlasⁱ	P38432
PRIDEⁱ	P38432
ProteomicsDBⁱ	55295

Protocols and materials databases

The DNASU plasmid repository More...DNASUⁱ	8161
Structural Biology Knowledgebase	Search...

Genome annotation databases

Ensemblⁱ	ENST00000240316; ENSP00000240316; ENSG00000121058
GeneIDⁱ	8161
KEGGⁱ	hsa:8161
UCSCⁱ	uc002iuu.4 human

Organism-specific databases

CTDⁱ	8161
DisGeNETⁱ	8161
EuPathDBⁱ	HostDB:ENSG00000121058.4
GeneCardsⁱ	COIL
HGNCⁱ	HGNC:2184 COIL
HPAⁱ	CAB017524 CAB069400 HPA027885 HPA068537
MIMⁱ	600272 gene
neXtProtⁱ	NX_P38432
OpenTargetsⁱ	ENSG00000121058
PharmGKBⁱ	PA26700
GenAtlas: human gene database More...GenAtlasⁱ	Search...

Phylogenomic databases

eggNOGⁱ	ENOG410IHAK Eukaryota ENOG41121C6 LUCA
GeneTreeⁱ	ENSGT00390000004832
HOGENOMⁱ	HOG000059586
HOVERGENⁱ	HBG007989
InParanoidⁱ	P38432
KOⁱ	K13150
OMAⁱ	HCTVFWL
OrthoDBⁱ	EOG091G0B3V
PhylomeDBⁱ	P38432
TreeFamⁱ	TF331811

Enzyme and pathway databases

SIGNORⁱ	P38432

SIGNORⁱ

P38432

Miscellaneous databases

ChiTaRSⁱ	COIL human
GeneWikiⁱ	Coilin
GenomeRNAiⁱ	8161
Protein Ontology More...PROⁱ	PR:P38432
SOURCEⁱ	Search...

Gene expression databases

Bgeeⁱ	ENSG00000121058 Expressed in 232 organ(s), highest expression level in sperm
CleanExⁱ	HS_COIL
ExpressionAtlasⁱ	P38432 baseline and differential
Genevisibleⁱ	P38432 HS

Family and domain databases

InterProⁱ	View protein in InterPro IPR024822 Coilin IPR031722 Coilin_N
PANTHERⁱ	PTHR15197 PTHR15197, 1 hit
Pfamⁱ	View protein in Pfam PF15862 Coilin_N, 1 hit
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	COIL_HUMAN
Accessionⁱ	P38432Primary (citable) accession number: P38432 Secondary accession number(s): B2R931
Entry historyⁱ	Integrated into UniProtKB/Swiss-Prot:	October 1, 1994
	Last sequence update:	October 1, 1994
	Last modified:	November 7, 2018
	This is version 167 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Reviewed (UniProtKB/Swiss-Prot)
Annotation program	Chordata Protein Annotation Program
Disclaimer	Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteome

Documents

SIMILARITY comments
Index of protein domains and families
MIM cross-references
Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
Human chromosome 17
Human chromosome 17: entries, gene names and cross-references to MIM

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Supporting data

UniProtKB - P38432 (COIL_HUMAN)

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Coilin

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<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

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Enzyme and pathway databases

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Nucleus

Nucleus

Other locations

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Mutagenesis

Organism-specific databases

Polymorphism and mutation databases

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Amino acid modifications

Keywords - PTMi

Proteomic databases

PTM databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Organism-specific databases

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Protein-protein interaction databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Region

Compositional bias

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Keywords - Domaini

Phylogenomic databases

Family and domain databases

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

PTM databases

Polymorphism and mutation databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Enzyme and pathway databases

Miscellaneous databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

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Functionⁱ

GO - Molecular functionⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

Pathology & Biotechⁱ

PTM / Processingⁱ

Keywords - PTMⁱ

Expressionⁱ

Interactionⁱ

GO - Molecular functionⁱ

Structureⁱ

Family & Domainsⁱ

Sequence similaritiesⁱ

Keywords - Domainⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ