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Entry version 189 (07 Oct 2020)
Sequence version 3 (18 Apr 2006)
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Protein

Trehalose synthase complex regulatory subunit TPS3

Gene

TPS3

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Regulatory subunit of the trehalose synthase complex that catalyzes the production of trehalose from glucose-6-phosphate and UDP-glucose in a two step process. May stabilize the trehalose synthase complex.1 Publication

Miscellaneous

Present with 13500 molecules/cell in log phase SD medium.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
MetaCyc:MONOMER3O-4030

Protein family/group databases

Carbohydrate-Active enZymes

More...
CAZyi
GT20, Glycosyltransferase Family 20

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Trehalose synthase complex regulatory subunit TPS3
Alternative name(s):
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 115 kDa subunit
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:TPS3
Ordered Locus Names:YMR261C
ORF Names:YM8156.03C
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri559292 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002311 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome XIII

Organism-specific databases

Eukaryotic Pathogen Database Resources

More...
EuPathDBi
FungiDB:YMR261C

Saccharomyces Genome Database

More...
SGDi
S000004874, TPS3

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cytoplasm

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001225101 – 1054Trehalose synthase complex regulatory subunit TPS3Add BLAST1054

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei148PhosphoserineCombined sources1
Modified residuei150PhosphoserineCombined sources1
Modified residuei181PhosphoserineCombined sources1
Modified residuei265PhosphothreonineCombined sources1
Modified residuei267PhosphoserineCombined sources1
Modified residuei273PhosphoserineCombined sources1
Modified residuei960PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQB - The MaxQuant DataBase

More...
MaxQBi
P38426

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
P38426

PRoteomics IDEntifications database

More...
PRIDEi
P38426

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
P38426

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section reports the experimentally proven effects of inducers and repressors (usually chemical compounds or environmental factors) on the level of protein (or mRNA) expression (up-regulation, down-regulation, constitutive expression).<p><a href='/help/induction' target='_top'>More...</a></p>Inductioni

Repressed by glucose.

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

The trehalose synthase complex is composed of the two catalytic subunits TPS1 and TPS2 and at least one of the two regulatory subunits TPS3 or TSL1.

1 Publication

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Hide details

GO - Molecular functioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
35439, 82 interactors

ComplexPortal: manually curated resource of macromolecular complexes

More...
ComplexPortali
CPX-582, Trehalose-6-phosphate synthase/phosphatase variant 1

Database of interacting proteins

More...
DIPi
DIP-891N

Protein interaction database and analysis system

More...
IntActi
P38426, 8 interactors

Molecular INTeraction database

More...
MINTi
P38426

STRING: functional protein association networks

More...
STRINGi
4932.YMR261C

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
P38426, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
P38426

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni287 – 778GlycosyltransferaseAdd BLAST492

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi125 – 249Ser-richAdd BLAST125

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

In the N-terminal section; belongs to the glycosyltransferase 20 family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1050, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000167933

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_002351_2_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
P38426

KEGG Orthology (KO)

More...
KOi
K22337

Identification of Orthologs from Complete Genome Data

More...
OMAi
ALNCEAD

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001830, Glyco_trans_20
IPR036412, HAD-like_sf
IPR003337, Trehalose_PPase

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00982, Glyco_transf_20, 1 hit
PF02358, Trehalose_PPase, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF56784, SSF56784, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

P38426-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTIIVASLFL PYTPQFEADV TNSDTAKLVE SSMIKVDCNN QELSNNKQER
60 70 80 90 100
SSSVTSASSH YIGLPQEAQI NGEPLQRANV GSPATGVNYH NEMEMLSSEQ
110 120 130 140 150
FLEELTANAT HAANSGIPPA NNPVSSGSTA QRPSVEEFFS APSARVCSPS
160 170 180 190 200
QEASASSISA SRSSAHHNDL SSSLMKNPNL SFDSHPPRVR SSSKSAVITP
210 220 230 240 250
VSKSVPDVDP AVVDVAKVRE EFQQQASLPS MKRVSGSTAG DSSIASSSSN
260 270 280 290 300
LRYSQQFQDN FIEDTDSEDD IDSDLETDAT KKYNVPKFGG YSNNAKLRAS
310 320 330 340 350
LMRNSYELFK HLPWTIVDSD KGNGSLKNAV NIAVAEKTVK EPVSWVGTMG
360 370 380 390 400
IPTDELPHEV CHKISKKLEQ DFSSFPVVTD DITFKGAYKN YAKQILWPTL
410 420 430 440 450
HYQIPDNPNS KAFEDHSWDY YQKVNQKFSD RIVSVYKPGD TIWIHDYHLM
460 470 480 490 500
LVPQMVREKL PKAKIGFFLH VSFPSSEVFR CLANRERILE GIIGANFVGF
510 520 530 540 550
QTKEYKRHFL QTCNRLLAAD VSNDEVKYHC NIVSVMYAPI GIDYYHLTSQ
560 570 580 590 600
LRNGSVLEWR QLIKERWRNK KLIVCRDQFD RIRGLQKKML AYERFLIENP
610 620 630 640 650
EYIEKVVLIQ ICIGKSSDPE YERQIMVVVD RINSLSSNIS ISQPVVFLHQ
660 670 680 690 700
DLDFAQYLAL NCEADVFLVD ALREGMNLTC HEFIVSSFEK NAPLLLSEFT
710 720 730 740 750
GSSSVLKEGA ILINPWDINH VAQSIKRSLE MSPEEKRRRW KKLFKSVIEH
760 770 780 790 800
DSDNWITKCF EYINNAWESN QETSTVFNLA PEKFCADYKA SKKHLFIFKI
810 820 830 840 850
SEPPTSRMLS LLSELSSNNI VYVLSSFTKN TFESLYNGVL NIGLIAENGA
860 870 880 890 900
YVRVNGSWYN IVEELDWMKE VAKIFDEKVE RLPGSYYKIA DSMIRFHTEN
910 920 930 940 950
ADDQDRVPTV IGEAITHINT LFDDRDIHAY VHKDIVFVQQ TGLALAAAEF
960 970 980 990 1000
LMKFYNSGVS PTDNSRISLS RTSSSMSVGN NKKHFQNQVD FVCVSGSTSP
1010 1020 1030 1040 1050
IIEPLFKLVK QEVEKNNLKF GYTILYGSSR STYAKEHING VNELFTILHD

LTAA
Length:1,054
Mass (Da):118,835
Last modified:April 18, 2006 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i02E1098B94838EA9
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti186P → L in AAA35224 (Ref. 1) Curated1
Sequence conflicti765N → D in AAA35224 (Ref. 1) Curated1
Sequence conflicti834S → G in AAA35224 (Ref. 1) Curated1
Sequence conflicti902D → E in AAA35224 (Ref. 1) Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
M88172 Genomic DNA Translation: AAA35224.1
Z49260 Genomic DNA Translation: CAA89244.1
AY692968 Genomic DNA Translation: AAT92987.1
BK006946 Genomic DNA Translation: DAA10161.1

NCBI Reference Sequences

More...
RefSeqi
NP_013988.1, NM_001182768.1

Genome annotation databases

Ensembl fungal genome annotation project

More...
EnsemblFungii
YMR261C_mRNA; YMR261C; YMR261C

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
855303

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
sce:YMR261C

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M88172 Genomic DNA Translation: AAA35224.1
Z49260 Genomic DNA Translation: CAA89244.1
AY692968 Genomic DNA Translation: AAT92987.1
BK006946 Genomic DNA Translation: DAA10161.1
RefSeqiNP_013988.1, NM_001182768.1

3D structure databases

SMRiP38426
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi35439, 82 interactors
ComplexPortaliCPX-582, Trehalose-6-phosphate synthase/phosphatase variant 1
DIPiDIP-891N
IntActiP38426, 8 interactors
MINTiP38426
STRINGi4932.YMR261C

Protein family/group databases

CAZyiGT20, Glycosyltransferase Family 20

PTM databases

iPTMnetiP38426

Proteomic databases

MaxQBiP38426
PaxDbiP38426
PRIDEiP38426

Genome annotation databases

EnsemblFungiiYMR261C_mRNA; YMR261C; YMR261C
GeneIDi855303
KEGGisce:YMR261C

Organism-specific databases

EuPathDBiFungiDB:YMR261C
SGDiS000004874, TPS3

Phylogenomic databases

eggNOGiKOG1050, Eukaryota
GeneTreeiENSGT00940000167933
HOGENOMiCLU_002351_2_0_1
InParanoidiP38426
KOiK22337
OMAiALNCEAD

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER3O-4030

Miscellaneous databases

Protein Ontology

More...
PROi
PR:P38426
RNActiP38426, protein

Family and domain databases

InterProiView protein in InterPro
IPR001830, Glyco_trans_20
IPR036412, HAD-like_sf
IPR003337, Trehalose_PPase
PfamiView protein in Pfam
PF00982, Glyco_transf_20, 1 hit
PF02358, Trehalose_PPase, 1 hit
SUPFAMiSSF56784, SSF56784, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiTPS3_YEAST
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P38426
Secondary accession number(s): D6W087, Q6B1W2
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: April 18, 2006
Last modified: October 7, 2020
This is version 189 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. SIMILARITY comments
    Index of protein domains and families
  3. Yeast chromosome XIII
    Yeast (Saccharomyces cerevisiae) chromosome XIII: entries and gene names
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