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Protein

Protein YRO2

Gene

YRO2

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Miscellaneous

Present with 1950 molecules/cell in log phase SD medium.1 Publication

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

BioCyciYEAST:G3O-29025-MONOMER

Protein family/group databases

TCDBi3.E.1.4.8 the ion-translocating microbial rhodopsin (mr) family

Names & Taxonomyi

Protein namesi
Recommended name:
Protein YRO2
Gene namesi
Name:YRO2
Ordered Locus Names:YBR054W
ORF Names:YBR0507
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:YBR054W
SGDiS000000258 YRO2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 34ExtracellularSequence analysisAdd BLAST34
Transmembranei35 – 55HelicalSequence analysisAdd BLAST21
Topological domaini56 – 62CytoplasmicSequence analysis7
Transmembranei63 – 83HelicalSequence analysisAdd BLAST21
Topological domaini84 – 119ExtracellularSequence analysisAdd BLAST36
Transmembranei120 – 140HelicalSequence analysisAdd BLAST21
Topological domaini141CytoplasmicSequence analysis1
Transmembranei142 – 162HelicalSequence analysisAdd BLAST21
Topological domaini163 – 172ExtracellularSequence analysis10
Transmembranei173 – 193HelicalSequence analysisAdd BLAST21
Topological domaini194 – 202CytoplasmicSequence analysis9
Transmembranei203 – 223HelicalSequence analysisAdd BLAST21
Topological domaini224 – 238ExtracellularSequence analysisAdd BLAST15
Transmembranei239 – 259HelicalSequence analysisAdd BLAST21
Topological domaini260 – 344CytoplasmicSequence analysisAdd BLAST85

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001962861 – 344Protein YRO2Add BLAST344

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Cross-linki286Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)1 Publication
Modified residuei293PhosphoserineCombined sources1
Modified residuei341PhosphothreonineCombined sources1
Modified residuei343PhosphoserineCombined sources1

Keywords - PTMi

Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

MaxQBiP38079
PaxDbiP38079
PRIDEiP38079

PTM databases

iPTMnetiP38079

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
KEL3Q089792EBI-29573,EBI-9638

Protein-protein interaction databases

BioGridi32755, 50 interactors
DIPiDIP-4184N
IntActiP38079, 18 interactors
MINTiP38079
STRINGi4932.YBR054W

Structurei

3D structure databases

ProteinModelPortaliP38079
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi304 – 331Lys-richAdd BLAST28
Compositional biasi334 – 344Glu-richAdd BLAST11

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

GeneTreeiENSGT00390000004481
HOGENOMiHOG000248243
InParanoidiP38079
OMAiTSEMVWY
OrthoDBiEOG092C44CH

Family and domain databases

InterProiView protein in InterPro
IPR001425 Arc/bac/fun_rhodopsins
PANTHERiPTHR28286 PTHR28286, 1 hit
PfamiView protein in Pfam
PF01036 Bac_rhodopsin, 1 hit
SMARTiView protein in SMART
SM01021 Bac_rhodopsin, 1 hit

Sequencei

Sequence statusi: Complete.

P38079-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDYVELLKR GGNEAIKINP PTGADFHITS RGSDWLFTVF CVNLLFGVIL
60 70 80 90 100
VPLMFRKPVK DRFVYYTAIA PNLFMSIAYF TMASNLGWIP VRAKYNHVQT
110 120 130 140 150
STQKEHPGYR QIFYARYVGW FLAFPWPIIQ MSLLGGTPLW QIAFNVGMTE
160 170 180 190 200
IFTVCWLIAA CVHSTYKWGY YTIGIGAAIV VCISLMTTTF NLVKARGKDV
210 220 230 240 250
SNVFITFMSV IMFLWLIAYP TCFGITDGGN VLQPDSATIF YGIIDLLILS
260 270 280 290 300
ILPVLFMPLA NYLGIERLGL IFDEEPAEHV GPVAEKKMPS PASFKSSDSD
310 320 330 340
SSIKEKLKLK KKHKKDKKKA KKAKKAKKAK KAQEEEEDVA TDSE
Length:344
Mass (Da):38,720
Last modified:October 1, 1994 - v1
Checksum:iBF63AC0398A0B566
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z46260 Genomic DNA Translation: CAA86397.1
Z35923 Genomic DNA Translation: CAA84997.1
BK006936 Genomic DNA Translation: DAA07173.1
PIRiS45912
RefSeqiNP_009610.1, NM_001178402.1

Genome annotation databases

EnsemblFungiiYBR054W; YBR054W; YBR054W
GeneIDi852343
KEGGisce:YBR054W

Similar proteinsi

Entry informationi

Entry nameiYRO2_YEAST
AccessioniPrimary (citable) accession number: P38079
Secondary accession number(s): D6VQ53
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: October 1, 1994
Last modified: July 18, 2018
This is version 138 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. 7-transmembrane G-linked receptors
    List of 7-transmembrane G-linked receptor entries
  2. SIMILARITY comments
    Index of protein domains and families
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome II
    Yeast (Saccharomyces cerevisiae) chromosome II: entries and gene names

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