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Protein

Uncharacterized HTH-type transcriptional regulator YfhH

Gene

yfhH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi37 – 56H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciEcoCyc:EG12308-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YfhH
Gene namesi
Name:yfhH
Ordered Locus Names:b2561, JW2545
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12308 yfhH

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000686261 – 282Uncharacterized HTH-type transcriptional regulator YfhHAdd BLAST282

Proteomic databases

PaxDbiP37767
PRIDEiP37767

Interactioni

Protein-protein interaction databases

BioGridi4261197, 14 interactors
DIPiDIP-12050N
STRINGi316385.ECDH10B_2729

Structurei

3D structure databases

ProteinModelPortaliP37767
SMRiP37767
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 77HTH rpiR-typePROSITE-ProRule annotationAdd BLAST77
Domaini125 – 265SISPROSITE-ProRule annotationAdd BLAST141

Phylogenomic databases

eggNOGiENOG4106G6Q Bacteria
COG1737 LUCA
HOGENOMiHOG000027157
InParanoidiP37767
OMAiHKFLRTP
PhylomeDBiP37767

Family and domain databases

CDDicd05013 SIS_RpiR, 1 hit
Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR000281 HTH_RpiR
IPR035472 RpiR-like_SIS
IPR001347 SIS
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF01418 HTH_6, 1 hit
PF01380 SIS, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS51071 HTH_RPIR, 1 hit
PS51464 SIS, 1 hit

Sequencei

Sequence statusi: Complete.

P37767-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNGLLRIRQR YQGLAQSDKK LADYLLLQPD TARHLSSQQL ANEAGVSQSS
60 70 80 90 100
VVKFAQKLGY KGFPALKLAL SEALASQPES PSVPIHNQIR GDDPLRLVGE
110 120 130 140 150
KLIKENTAAM YATLNVNSEE KLHECVTMLR SARRIILTGI GASGLVAQNF
160 170 180 190 200
AWKLMKIGFN AAAVRDMHAL LATVQASSPD DLLLAISYTG VRRELNLAAD
210 220 230 240 250
EMLRVGGKVL AITGFTPNAL QQRASHCLYT IAEEQATNSA SISACHAQGM
260 270 280
LTDLLFIALI QQDLELAPER IRHSEALVKK LV
Length:282
Mass (Da):30,708
Last modified:November 1, 1995 - v2
Checksum:iFF0AE2A0BF4E3C48
GO

Sequence cautioni

The sequence AAA79823 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated
The sequence BAA10911 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D64044 Genomic DNA Translation: BAA10911.1 Different initiation.
U36841 Genomic DNA Translation: AAA79823.1 Different initiation.
U00096 Genomic DNA Translation: AAC75614.2
AP009048 Genomic DNA Translation: BAE76737.1
X72336 Genomic DNA No translation available.
RefSeqiNP_417056.2, NC_000913.3
WP_001013779.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75614; AAC75614; b2561
BAE76737; BAE76737; BAE76737
GeneIDi947030
KEGGiecj:JW2545
eco:b2561
PATRICifig|1411691.4.peg.4173

Similar proteinsi

Entry informationi

Entry nameiYFHH_ECOLI
AccessioniPrimary (citable) accession number: P37767
Secondary accession number(s): P76588, Q2MAG9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: November 1, 1995
Last modified: March 28, 2018
This is version 125 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

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