UniProtKB - P37641 (YHJC_ECOLI)
Protein
Uncharacterized HTH-type transcriptional regulator YhjC
Gene
yhjC
Organism
Escherichia coli (strain K12)
Status
Functioni
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
DNA bindingi | 19 – 38 | H-T-H motifPROSITE-ProRule annotationAdd BLAST | 20 |
GO - Molecular functioni
- DNA-binding transcription factor activity Source: GO_Central
- sequence-specific DNA binding Source: GO_Central
GO - Biological processi
- transcription, DNA-templated Source: GO_Central
Keywordsi
Molecular function | DNA-binding |
Biological process | Transcription, Transcription regulation |
Enzyme and pathway databases
BioCyci | EcoCyc:EG12247-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: Uncharacterized HTH-type transcriptional regulator YhjC |
Gene namesi | Name:yhjC Ordered Locus Names:b3521, JW3489 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000105799 | 1 – 299 | Uncharacterized HTH-type transcriptional regulator YhjCAdd BLAST | 299 |
Proteomic databases
PaxDbi | P37641 |
PRIDEi | P37641 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 4262157, 11 interactors |
DIPi | DIP-12378N |
IntActi | P37641, 2 interactors |
STRINGi | 511145.b3521 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 1 – 59 | HTH lysR-typePROSITE-ProRule annotationAdd BLAST | 59 |
Sequence similaritiesi
Belongs to the LysR transcriptional regulatory family.Curated
Phylogenomic databases
eggNOGi | COG0583, Bacteria |
HOGENOMi | CLU_039613_16_3_6 |
InParanoidi | P37641 |
PhylomeDBi | P37641 |
Family and domain databases
Gene3Di | 1.10.10.10, 1 hit |
InterProi | View protein in InterPro IPR005119, LysR_subst-bd IPR000847, Tscrpt_reg_HTH_LysR IPR036388, WH-like_DNA-bd_sf IPR036390, WH_DNA-bd_sf |
Pfami | View protein in Pfam PF00126, HTH_1, 1 hit PF03466, LysR_substrate, 1 hit |
SUPFAMi | SSF46785, SSF46785, 1 hit |
PROSITEi | View protein in PROSITE PS50931, HTH_LYSR, 1 hit |
i Sequence
Sequence statusi: Complete.
P37641-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MDKIHAMQLF IKVAELESFS RAADFFALPK GSVSRQIQAL EHQLGTQLLQ
60 70 80 90 100
RTTRRVKLTP EGMTYYQRAK DVLSNLSELD GLFQQDATSI SGKLRIDIPP
110 120 130 140 150
GIAKSLLLPR LSEFLYLHPG IELELSSHDR PVDILHDGFD CVIRTGALPE
160 170 180 190 200
DGVIARPLGK LTMVNCASPH YLTRFGYPQS PDDLTSHAIV RYTPHLGVHP
210 220 230 240 250
LGFEVASVNG VQWFKSGGML TVNSSENYLT AGLAGLGIIQ IPRIAVREAL
260 270 280 290
RAGRLIEVLP GYRAEPLSLS LVYPQRRELS RRVNLFMQWL AGVMKEYLD
Sequence cautioni
The sequence AAB18497 differs from that shown. Reason: Erroneous initiation.Curated
The sequence BAE77773 differs from that shown. Reason: Erroneous initiation.Curated
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U00039 Genomic DNA Translation: AAB18497.1 Different initiation. U00096 Genomic DNA Translation: AAC76546.2 AP009048 Genomic DNA Translation: BAE77773.1 Different initiation. |
PIRi | S47741 |
RefSeqi | NP_417978.2, NC_000913.3 WP_000357790.1, NZ_CP047127.1 |
Genome annotation databases
EnsemblBacteriai | AAC76546; AAC76546; b3521 BAE77773; BAE77773; BAE77773 |
GeneIDi | 948035 |
KEGGi | ecj:JW3489 eco:b3521 |
PATRICi | fig|511145.12.peg.3630 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | U00039 Genomic DNA Translation: AAB18497.1 Different initiation. U00096 Genomic DNA Translation: AAC76546.2 AP009048 Genomic DNA Translation: BAE77773.1 Different initiation. |
PIRi | S47741 |
RefSeqi | NP_417978.2, NC_000913.3 WP_000357790.1, NZ_CP047127.1 |
3D structure databases
SMRi | P37641 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 4262157, 11 interactors |
DIPi | DIP-12378N |
IntActi | P37641, 2 interactors |
STRINGi | 511145.b3521 |
Proteomic databases
PaxDbi | P37641 |
PRIDEi | P37641 |
Genome annotation databases
EnsemblBacteriai | AAC76546; AAC76546; b3521 BAE77773; BAE77773; BAE77773 |
GeneIDi | 948035 |
KEGGi | ecj:JW3489 eco:b3521 |
PATRICi | fig|511145.12.peg.3630 |
Organism-specific databases
EchoBASEi | EB2158 |
Phylogenomic databases
eggNOGi | COG0583, Bacteria |
HOGENOMi | CLU_039613_16_3_6 |
InParanoidi | P37641 |
PhylomeDBi | P37641 |
Enzyme and pathway databases
BioCyci | EcoCyc:EG12247-MONOMER |
Miscellaneous databases
PROi | PR:P37641 |
Family and domain databases
Gene3Di | 1.10.10.10, 1 hit |
InterProi | View protein in InterPro IPR005119, LysR_subst-bd IPR000847, Tscrpt_reg_HTH_LysR IPR036388, WH-like_DNA-bd_sf IPR036390, WH_DNA-bd_sf |
Pfami | View protein in Pfam PF00126, HTH_1, 1 hit PF03466, LysR_substrate, 1 hit |
SUPFAMi | SSF46785, SSF46785, 1 hit |
PROSITEi | View protein in PROSITE PS50931, HTH_LYSR, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YHJC_ECOLI | |
Accessioni | P37641Primary (citable) accession number: P37641 Secondary accession number(s): Q2M7I3 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | October 1, 1994 |
Last sequence update: | December 15, 1998 | |
Last modified: | April 7, 2021 | |
This is version 140 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families