UniProtKB - P37545 (YABD_BACSU)
Protein
Uncharacterized metal-dependent hydrolase YabD
Gene
yabD
Organism
Bacillus subtilis (strain 168)
Status
Functioni
Cofactori
a divalent metal cationBy similarityNote: Binds 2 divalent metal cations per subunit.By similarity
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Metal bindingi | 6 | Divalent metal cation 1By similarity | 1 | |
Metal bindingi | 8 | Divalent metal cation 1By similarity | 1 | |
Metal bindingi | 92 | Divalent metal cation 1By similarity | 1 | |
Metal bindingi | 92 | Divalent metal cation 2By similarity | 1 | |
Metal bindingi | 128 | Divalent metal cation 2By similarity | 1 | |
Metal bindingi | 153 | Divalent metal cation 2By similarity | 1 | |
Metal bindingi | 203 | Divalent metal cation 1By similarity | 1 |
GO - Molecular functioni
- endodeoxyribonuclease activity, producing 5'-phosphomonoesters Source: InterPro
- metal ion binding Source: UniProtKB-KW
Keywordsi
Molecular function | Hydrolase |
Ligand | Metal-binding |
Enzyme and pathway databases
BioCyci | BSUB:BSU00390-MONOMER |
Names & Taxonomyi
Protein namesi | |
Gene namesi | Name:yabD Ordered Locus Names:BSU00390 |
Organismi | Bacillus subtilis (strain 168) |
Taxonomic identifieri | 224308 [NCBI] |
Taxonomic lineagei | Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000202001 | 1 – 255 | Uncharacterized metal-dependent hydrolase YabDAdd BLAST | 255 |
Proteomic databases
PaxDbi | P37545 |
PRIDEi | P37545 |
Family & Domainsi
Sequence similaritiesi
Phylogenomic databases
eggNOGi | COG0084, Bacteria |
InParanoidi | P37545 |
OMAi | SPYLTPH |
PhylomeDBi | P37545 |
Family and domain databases
CDDi | cd01310, TatD_DNAse, 1 hit |
InterProi | View protein in InterPro IPR018228, DNase_TatD-rel_CS IPR015991, Hydrolase_TatD-type IPR032466, Metal_Hydrolase IPR001130, TatD_family |
Pfami | View protein in Pfam PF01026, TatD_DNase, 1 hit |
PIRSFi | PIRSF005902, DNase_TatD, 1 hit |
SUPFAMi | SSF51556, SSF51556, 1 hit |
TIGRFAMsi | TIGR00010, TIGR00010, 1 hit |
PROSITEi | View protein in PROSITE PS01137, TATD_1, 1 hit PS01090, TATD_2, 1 hit PS01091, TATD_3, 1 hit |
i Sequence
Sequence statusi: Complete.
P37545-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MLFDTHAHLN AEQYDTDLEE VIERAKAEKV ERIVVVGFDR PTITRAMEMI
60 70 80 90 100
EEYDFIYAAI GWHPVDAIDM TEEDLAWIKE LSAHEKVVAI GEMGLDYHWD
110 120 130 140 150
KSPKDIQKEV FRNQIALAKE VNLPIIIHNR DATEDVVTIL KEEGAEAVGG
160 170 180 190 200
IMHCFTGSAE VARECMKMNF YLSFGGPVTF KNAKKPKEVV KEIPNDRLLI
210 220 230 240 250
ETDCPFLTPH PFRGKRNEPS YVKYVAEQIA ELKEMTFEEI ASITTENAKR
LFRIN
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | D26185 Genomic DNA Translation: BAA05274.1 AL009126 Genomic DNA Translation: CAB11815.1 |
PIRi | S66068 |
RefSeqi | NP_387920.1, NC_000964.3 WP_003226756.1, NZ_JNCM01000028.1 |
Genome annotation databases
EnsemblBacteriai | CAB11815; CAB11815; BSU00390 |
GeneIDi | 936949 |
KEGGi | bsu:BSU00390 |
PATRICi | fig|224308.179.peg.39 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | D26185 Genomic DNA Translation: BAA05274.1 AL009126 Genomic DNA Translation: CAB11815.1 |
PIRi | S66068 |
RefSeqi | NP_387920.1, NC_000964.3 WP_003226756.1, NZ_JNCM01000028.1 |
3D structure databases
SMRi | P37545 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 224308.BSU00390 |
Proteomic databases
PaxDbi | P37545 |
PRIDEi | P37545 |
Genome annotation databases
EnsemblBacteriai | CAB11815; CAB11815; BSU00390 |
GeneIDi | 936949 |
KEGGi | bsu:BSU00390 |
PATRICi | fig|224308.179.peg.39 |
Phylogenomic databases
eggNOGi | COG0084, Bacteria |
InParanoidi | P37545 |
OMAi | SPYLTPH |
PhylomeDBi | P37545 |
Enzyme and pathway databases
BioCyci | BSUB:BSU00390-MONOMER |
Family and domain databases
CDDi | cd01310, TatD_DNAse, 1 hit |
InterProi | View protein in InterPro IPR018228, DNase_TatD-rel_CS IPR015991, Hydrolase_TatD-type IPR032466, Metal_Hydrolase IPR001130, TatD_family |
Pfami | View protein in Pfam PF01026, TatD_DNase, 1 hit |
PIRSFi | PIRSF005902, DNase_TatD, 1 hit |
SUPFAMi | SSF51556, SSF51556, 1 hit |
TIGRFAMsi | TIGR00010, TIGR00010, 1 hit |
PROSITEi | View protein in PROSITE PS01137, TATD_1, 1 hit PS01090, TATD_2, 1 hit PS01091, TATD_3, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YABD_BACSU | |
Accessioni | P37545Primary (citable) accession number: P37545 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | October 1, 1994 |
Last sequence update: | October 1, 1994 | |
Last modified: | December 2, 2020 | |
This is version 123 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families