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Entry version 118 (07 Nov 2018)
Sequence version 1 (01 Oct 1994)
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Protein

Uncharacterized protein YyaL

Gene

yyaL

Organism
Bacillus subtilis (strain 168)
Status
Reviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
BSUB:BSU40820-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Uncharacterized protein YyaL
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:yyaL
Ordered Locus Names:BSU40820
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiBacillus subtilis (strain 168)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri224308 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001570 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000500541 – 689Uncharacterized protein YyaLAdd BLAST689

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

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PaxDbi
P37512

PRoteomics IDEntifications database

More...
PRIDEi
P37512

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

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STRINGi
224308.Bsubs1_010100022036

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

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ProteinModelPortali
P37512

Database of comparative protein structure models

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ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

To C.elegans B0495.5.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG4105C7Z Bacteria
COG1331 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000231201

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
P37512

KEGG Orthology (KO)

More...
KOi
K06888

Identification of Orthologs from Complete Genome Data

More...
OMAi
SSCHWCT

Database for complete collections of gene phylogenies

More...
PhylomeDBi
P37512

Family and domain databases

Conserved Domains Database

More...
CDDi
cd02955 SSP411, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.50.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR008928 6-hairpin_glycosidase_sf
IPR012341 6hp_glycosidase-like_sf
IPR004879 DUF255
IPR024705 Ssp411
IPR036249 Thioredoxin-like_sf

The PANTHER Classification System

More...
PANTHERi
PTHR42899 PTHR42899, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF03190 Thioredox_DsbH, 1 hit

PIRSF; a whole-protein classification database

More...
PIRSFi
PIRSF006402 UCP006402_thioredoxin, 1 hit

Superfamily database of structural and functional annotation

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SUPFAMi
SSF48208 SSF48208, 1 hit
SSF52833 SSF52833, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

P37512-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPNKSKPNRL INEKSPYLLQ HAHNPVDWFP WGEEAFEKAK RENKPVLVSI
60 70 80 90 100
GYSTCHWCHV MAHESFEDEE IARLLNERFV AIKVDREERP DVDSVYMRIC
110 120 130 140 150
QLMTGQGGWP LNVFITPDQK PFYAGTYFPK TSKFNRPGFV DVLEHLSETF
160 170 180 190 200
ANDREHVEDI AENAAKHLQT KTAAKTGEGL SESAIHRTFQ QLASGFDTIY
210 220 230 240 250
GGFGQAPKFP MPHMLMYLLR YDHNTGQENA LYNVTKTLDS MANGGIYDHI
260 270 280 290 300
GYGFARYSTD DEWLVPHFEK MLYDNALLLT AYTEAYQVTQ NSRYKEICEQ
310 320 330 340 350
IITFIQREMT HEDGSFFSAL DADTEGEEGK YYVWSKEEIL KTLGDDLGTL
360 370 380 390 400
YCQVYDITEE GNFEGKNIPN LIHTKREQIK EDAGLTEKEL SLKLEDARQQ
410 420 430 440 450
LLKTREERTY PHVDDKVLTS WNALMIAGLA KAAKVYQEPK YLSLAKDAIT
460 470 480 490 500
FIENKLIIDG RVMVRYRDGE VKNKGFIDDY AFLLWAYLDL YEASFDLSYL
510 520 530 540 550
QKAKKLTDDM ISLFWDEEHG GFYFTGHDAE ALIVREKEVY DGAVPSGNSV
560 570 580 590 600
AAVQLLRLGQ VTGDLSLIEK AETMFSVFKP DIEAYPSGHA FFMQSVLRHL
610 620 630 640 650
MPKKEIVIFG SADDPARKQI IAELQKAFKP NDSILVAEQP EQCKDIAPFA
660 670 680
ADYRIIDGKT TVYICENFAC QQPTTNIEEA IHTLISSRD
Length:689
Mass (Da):78,755
Last modified:October 1, 1994 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iDB4783D97371428F
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
D26185 Genomic DNA Translation: BAA05212.1
AL009126 Genomic DNA Translation: CAB16119.1

Protein sequence database of the Protein Information Resource

More...
PIRi
S66006

NCBI Reference Sequences

More...
RefSeqi
NP_391962.1, NC_000964.3
WP_009968448.1, NZ_JNCM01000034.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
CAB16119; CAB16119; BSU40820

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
937904

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
bsu:BSU40820

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|224308.179.peg.4423

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D26185 Genomic DNA Translation: BAA05212.1
AL009126 Genomic DNA Translation: CAB16119.1
PIRiS66006
RefSeqiNP_391962.1, NC_000964.3
WP_009968448.1, NZ_JNCM01000034.1

3D structure databases

ProteinModelPortaliP37512
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224308.Bsubs1_010100022036

Proteomic databases

PaxDbiP37512
PRIDEiP37512

Protocols and materials databases

The DNASU plasmid repository

More...
DNASUi
937904
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB16119; CAB16119; BSU40820
GeneIDi937904
KEGGibsu:BSU40820
PATRICifig|224308.179.peg.4423

Phylogenomic databases

eggNOGiENOG4105C7Z Bacteria
COG1331 LUCA
HOGENOMiHOG000231201
InParanoidiP37512
KOiK06888
OMAiSSCHWCT
PhylomeDBiP37512

Enzyme and pathway databases

BioCyciBSUB:BSU40820-MONOMER

Family and domain databases

CDDicd02955 SSP411, 1 hit
Gene3Di1.50.10.10, 1 hit
InterProiView protein in InterPro
IPR008928 6-hairpin_glycosidase_sf
IPR012341 6hp_glycosidase-like_sf
IPR004879 DUF255
IPR024705 Ssp411
IPR036249 Thioredoxin-like_sf
PANTHERiPTHR42899 PTHR42899, 1 hit
PfamiView protein in Pfam
PF03190 Thioredox_DsbH, 1 hit
PIRSFiPIRSF006402 UCP006402_thioredoxin, 1 hit
SUPFAMiSSF48208 SSF48208, 1 hit
SSF52833 SSF52833, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiYYAL_BACSU
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P37512
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1994
Last sequence update: October 1, 1994
Last modified: November 7, 2018
This is version 118 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Bacillus subtilis
    Bacillus subtilis (strain 168): entries, gene names and cross-references to SubtiList
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