UniProtKB - P37384 (DMC1_LILLO)
Protein
Meiotic recombination protein DMC1 homolog
Gene
LIM15
Organism
Lilium longiflorum (Trumpet lily)
Status
Functioni
May participate in meiotic recombination.
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Binding sitei | 240 | ssDNA or dsDNABy similarity | 1 | |
Binding sitei | 243 | ssDNABy similarity | 1 | |
Binding sitei | 246 | ssDNA or dsDNABy similarity | 1 | |
Binding sitei | 252 | ssDNA or dsDNABy similarity | 1 | |
Binding sitei | 320 | ssDNABy similarity | 1 |
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Nucleotide bindingi | 138 – 145 | ATPSequence analysis | 8 |
GO - Molecular functioni
- ATP binding Source: UniProtKB-KW
- DNA binding Source: UniProtKB-KW
- DNA-dependent ATPase activity Source: InterPro
- recombinase activity Source: InterPro
GO - Biological processi
- DNA repair Source: InterPro
- reciprocal meiotic recombination Source: InterPro
Keywordsi
Molecular function | DNA-binding |
Biological process | Cell cycle, Meiosis |
Ligand | ATP-binding, Nucleotide-binding |
Names & Taxonomyi
Protein namesi | Recommended name: Meiotic recombination protein DMC1 homolog |
Gene namesi | Name:LIM15 |
Organismi | Lilium longiflorum (Trumpet lily) |
Taxonomic identifieri | 4690 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › Liliopsida › Liliales › Liliaceae › Lilium |
Subcellular locationi
Keywords - Cellular componenti
NucleusPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000122921 | 1 – 349 | Meiotic recombination protein DMC1 homologAdd BLAST | 349 |
Interactioni
Subunit structurei
Double stacked ring-shaped homooctamer.
By similarityFamily & Domainsi
Sequence similaritiesi
Family and domain databases
CDDi | cd01123, Rad51_DMC1_radA, 1 hit |
InterProi | View protein in InterPro IPR003593, AAA+_ATPase IPR011940, Dmc1 IPR013632, DNA_recomb/repair_Rad51_C IPR016467, DNA_recomb/repair_RecA-like IPR010995, DNA_repair_Rad51/TF_NusA_a-hlx IPR027417, P-loop_NTPase IPR033925, Rad51_DMC1_RadA IPR020588, RecA_ATP-bd IPR020587, RecA_monomer-monomer_interface |
Pfami | View protein in Pfam PF08423, Rad51, 1 hit |
PIRSFi | PIRSF005856, Rad51, 1 hit |
SMARTi | View protein in SMART SM00382, AAA, 1 hit |
SUPFAMi | SSF47794, SSF47794, 1 hit SSF52540, SSF52540, 1 hit |
TIGRFAMsi | TIGR02238, recomb_DMC1, 1 hit |
PROSITEi | View protein in PROSITE PS50162, RECA_2, 1 hit PS50163, RECA_3, 1 hit |
i Sequence
Sequence statusi: Complete.
P37384-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MVDVKFEERR FESPGQLQLL DRQEAEEEEE DCFESIDKLI SQGINAGDVK
60 70 80 90 100
KLQDAGIYTC NGLMMHTKKN LTGIKGLSEA KVDKICEAAE KLVNVGYITG
110 120 130 140 150
SDVLLKRKSV IRITTGSQAL DELLGGGIET LQITEAFGEF RSGKTQIAHT
160 170 180 190 200
LCVSTQLPVS MHGGNGKVAY IDTEGTFRPD RIVPIAERFG MDASAVLDNI
210 220 230 240 250
IYARAYTYEH QYNLLLALAA KMSEEPFRLL IVDSVIALFR VDFSGRGELA
260 270 280 290 300
ERQQKLAQML SRLTKIAEEF NVAVYMTNQV IADPGGGMFI SDPKKPAGGH
310 320 330 340
VLAHAATVRL MLRKGKGEQR VCKIFDAPNL PESEAVFQIT PGGVADAKD
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | D21821 mRNA Translation: BAA04845.1 |
PIRi | JC2214 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | D21821 mRNA Translation: BAA04845.1 |
PIRi | JC2214 |
3D structure databases
SMRi | P37384 |
ModBasei | Search... |
Family and domain databases
CDDi | cd01123, Rad51_DMC1_radA, 1 hit |
InterProi | View protein in InterPro IPR003593, AAA+_ATPase IPR011940, Dmc1 IPR013632, DNA_recomb/repair_Rad51_C IPR016467, DNA_recomb/repair_RecA-like IPR010995, DNA_repair_Rad51/TF_NusA_a-hlx IPR027417, P-loop_NTPase IPR033925, Rad51_DMC1_RadA IPR020588, RecA_ATP-bd IPR020587, RecA_monomer-monomer_interface |
Pfami | View protein in Pfam PF08423, Rad51, 1 hit |
PIRSFi | PIRSF005856, Rad51, 1 hit |
SMARTi | View protein in SMART SM00382, AAA, 1 hit |
SUPFAMi | SSF47794, SSF47794, 1 hit SSF52540, SSF52540, 1 hit |
TIGRFAMsi | TIGR02238, recomb_DMC1, 1 hit |
PROSITEi | View protein in PROSITE PS50162, RECA_2, 1 hit PS50163, RECA_3, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | DMC1_LILLO | |
Accessioni | P37384Primary (citable) accession number: P37384 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | October 1, 1994 |
Last sequence update: | October 1, 1994 | |
Last modified: | December 2, 2020 | |
This is version 88 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |