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UniProtKB - P35494 (PMGI_TOBAC)

Entry version 103 (02 Dec 2020)
Sequence version 1 (01 Jun 1994)
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Protein

2,3-bisphosphoglycerate-independent phosphoglycerate mutase

Gene
N/A
Organism
Nicotiana tabacum (Common tobacco)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.By similarity

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the 'Function' section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

Mn2+By similarityNote: Binds 2 manganese ions per subunit.By similarity

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section describes the metabolic pathway(s) associated with a protein.<p><a href='/help/pathway' target='_top'>More...</a></p>Pathwayi: glycolysis

This protein is involved in step 3 of the subpathway that synthesizes pyruvate from D-glyceraldehyde 3-phosphate.
Proteins known to be involved in the 5 steps of the subpathway in this organism are:
  1. Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (GAPC)
  2. Phosphoglycerate kinase, cytosolic
  3. Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (LOC107831677), 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) (LOC107769473)
  4. Phosphopyruvate hydratase (LOC107792078), Phosphopyruvate hydratase (LOC107832416), Phosphopyruvate hydratase (LOC107806838), Phosphopyruvate hydratase (LOC107781796), Phosphopyruvate hydratase (LOC107778291), Phosphopyruvate hydratase, Phosphopyruvate hydratase (LOC107796735), Phosphopyruvate hydratase (LOC107779604), Phosphopyruvate hydratase (LOC107782995), Phosphopyruvate hydratase (LOC107776643), Phosphopyruvate hydratase (LOC107808060), Phosphopyruvate hydratase (LOC107808060)
  5. Pyruvate kinase (LOC107803087), Pyruvate kinase (LOC107824278), Pyruvate kinase (LOC107761670), Pyruvate kinase (LOC107807979), Pyruvate kinase (LOC107830802), Pyruvate kinase (LOC107830802), Pyruvate kinase, cytosolic isozyme, Pyruvate kinase (LOC107787533), Pyruvate kinase (LOC107797877), Pyruvate kinase (LOC107778911), Pyruvate kinase (LOC107821513), Pyruvate kinase (LOC107830388), Pyruvate kinase (LOC107794535), Pyruvate kinase (LOC107820699), Pyruvate kinase (LOC107830388), Pyruvate kinase (LOC107803077), Pyruvate kinase (LOC107822892), Pyruvate kinase (LOC107783505), Pyruvate kinase (LOC107827388), Pyruvate kinase (LOC107782568), Pyruvate kinase (LOC107777547), Pyruvate kinase, Pyruvate kinase isozyme G, chloroplastic, Pyruvate kinase isozyme A, chloroplastic, Pyruvate kinase (LOC107799668), Pyruvate kinase (LOC107773422), Pyruvate kinase (LOC107787620), Pyruvate kinase (LOC107818508), Pyruvate kinase (LOC107794535), Pyruvate kinase (LOC107760370), Pyruvate kinase (LOC107782907), Pyruvate kinase (PKTL7), Pyruvate kinase (LOC107818508)
This subpathway is part of the pathway glycolysis, which is itself part of Carbohydrate degradation.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes pyruvate from D-glyceraldehyde 3-phosphate, the pathway glycolysis and in Carbohydrate degradation.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the 'Description' field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi28Manganese 2By similarity1
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei81Phosphoserine intermediateBy similarity1
Metal bindingi81Manganese 2By similarity1
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei140SubstrateBy similarity1
Binding sitei206SubstrateBy similarity1
Binding sitei213SubstrateBy similarity1
Binding sitei361SubstrateBy similarity1
Metal bindingi430Manganese 1By similarity1
Metal bindingi434Manganese 1By similarity1
Metal bindingi471Manganese 2By similarity1
Metal bindingi472Manganese 2By similarity1
Metal bindingi501Manganese 1By similarity1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionIsomerase
Biological processGlycolysis
LigandManganese, Metal-binding

Enzyme and pathway databases

UniPathway: a resource for the exploration and annotation of metabolic pathways

More...UniPathwayi		UPA00109;UER00186

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.12)
Short name:
BPG-independent PGAM
Short name:
Phosphoglyceromutase
Alternative name(s):
PGAM-I
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiNicotiana tabacum (Common tobacco)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri4097 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › asterids › lamiids › Solanales › Solanaceae › Nicotianoideae › Nicotianeae › Nicotiana
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000084051 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Genome assembly

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Cytoplasm

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002121141 – 5592,3-bisphosphoglycerate-independent phosphoglycerate mutaseAdd BLAST559

Proteomic databases

PRoteomics IDEntifications database

More...PRIDEi		P35494

Protein Mass spectra EXtraction

More...ProMEXi		P35494

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Found ubiquitously in germinating seed.

<p>This subsection of the 'Expression' section provides information on the expression of the gene product at various stages of a cell, tissue or organism development. By default, the information is derived from experiments at the mRNA level, unless specified 'at the protein level'.<p><a href='/help/developmental_stage' target='_top'>More...</a></p>Developmental stagei

Expression most important during germination, it decreases during development.

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Monomer.

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		P35494

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni170 – 171Substrate bindingBy similarity2
Regioni286 – 289Substrate bindingBy similarity4

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the BPG-independent phosphoglycerate mutase family.Curated

Family and domain databases

Conserved Domains Database

More...CDDi		cd16010, iPGM, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		3.40.1450.10, 1 hit
3.40.720.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR017850, Alkaline_phosphatase_core_sf
IPR011258, BPG-indep_PGM_N
IPR006124, Metalloenzyme
IPR036646, PGAM_B_sf
IPR005995, Pgm_bpd_ind

The PANTHER Classification System

More...PANTHERi		PTHR31637, PTHR31637, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF06415, iPGM_N, 1 hit
PF01676, Metalloenzyme, 1 hit

PIRSF; a whole-protein classification database

More...PIRSFi		PIRSF001492, IPGAM, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF53649, SSF53649, 1 hit
SSF64158, SSF64158, 1 hit

TIGRFAMs; a protein family database

More...TIGRFAMsi		TIGR01307, pgm_bpd_ind, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

P35494-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGSSGDAWKL KDHPKLPKGK TVAVIVLDGW GEAKPNEFNA IHVAETPVMY 
        60         70         80         90        100
SLKNGAPEKW RLIKAHGNAV GLPTEDDMGN SEVGHNALGA GRIFAQGAKL 
       110        120        130        140        150
VDLALASGKI YEGEGFKYVK ECFEKGTLHL IGLLSDGGVH SRLDQVQLLL 
       160        170        180        190        200
KGAAKHGAKR IRVHALTDGR DVLDGSSVGF METLENSLAQ LREKGIDAQV 
       210        220        230        240        250
ASGGGRMYVT MDRYENDWDV VKRGWDAQVL GEAPHKFKDP VEAVKKLRQE 
       260        270        280        290        300
PNANDQYLAP FVIVDDNGKP VAAILDGDAV VTFNFRADRM VMLAKALEYE 
       310        320        330        340        350
NFDKFDRVRV PKIRYAGMLQ YHGELQLPSH YLVSPPEIAR HSGEYLVRNG 
       360        370        380        390        400
VRTFACSETV KFGHVTFFWN GNRSGYFNEK LEEYVEIPSD SGITFNVKPK 
       410        420        430        440        450
MKALEIAERT RDAILSGKFD QVRVNLPNGD MVGHTGDIKA TIEACKSADE 
       460        470        480        490        500
AVKMILEAIE QVGGIYLVTA DHGNAEDMVK RNKKGEPALD KNGNIQILTS 
       510        520        530        540        550
HTCEPVPIAI GGPGLAPGVR FRQDLPTGGL ANVAATFMNL HGSEAPSDYE 

PSLIEVVDN
Length:559
Mass (Da):61,067
Last modified:June 1, 1994 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i3DAD4138CEBD4F4E
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
X70651 mRNA Translation: CAA49994.1

Protein sequence database of the Protein Information Resource

More...PIRi		S44373

NCBI Reference Sequences

More...RefSeqi		NP_001311960.1, NM_001325031.1

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...GeneIDi		107769473

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		nta:107769473

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X70651 mRNA Translation: CAA49994.1
PIRiS44373
RefSeqiNP_001311960.1, NM_001325031.1

3D structure databases

SMRiP35494
ModBaseiSearch...

Proteomic databases

PRIDEiP35494
ProMEXiP35494

Genome annotation databases

GeneIDi107769473
KEGGinta:107769473

Enzyme and pathway databases

UniPathwayiUPA00109;UER00186

Family and domain databases

CDDicd16010, iPGM, 1 hit
Gene3Di3.40.1450.10, 1 hit
3.40.720.10, 1 hit
InterProiView protein in InterPro
IPR017850, Alkaline_phosphatase_core_sf
IPR011258, BPG-indep_PGM_N
IPR006124, Metalloenzyme
IPR036646, PGAM_B_sf
IPR005995, Pgm_bpd_ind
PANTHERiPTHR31637, PTHR31637, 1 hit
PfamiView protein in Pfam
PF06415, iPGM_N, 1 hit
PF01676, Metalloenzyme, 1 hit
PIRSFiPIRSF001492, IPGAM, 1 hit
SUPFAMiSSF53649, SSF53649, 1 hit
SSF64158, SSF64158, 1 hit
TIGRFAMsiTIGR01307, pgm_bpd_ind, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPMGI_TOBAC
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P35494
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 1, 1994
Last sequence update: June 1, 1994
Last modified: December 2, 2020
This is version 103 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families
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