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Protein

50S ribosomal protein L44e

Gene

rpl44e

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA. Binds deacetylated tRNA in the E site; when the tRNA binds a stretch of 7 amino acids are displaced to allow binding.

Cofactori

Zn2+CuratedNote: Binds 1 zinc ion per subunit.Curated

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi11ZincCurated1
Metal bindingi14ZincCurated1
Metal bindingi71ZincCurated1
Metal bindingi74ZincCurated1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri11 – 74C4-typeCuratedAdd BLAST64

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding, tRNA-binding
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L44eUniRule annotation
Alternative name(s):
HLA
La
Gene namesi
Name:rpl44eUniRule annotation
Ordered Locus Names:rrnAC3514
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaStenosarchaea groupHalobacteriaHalobacterialesHaloarculaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001491501 – 9250S ribosomal protein L44eAdd BLAST92

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Interacts weakly with protein L15e. Binds the E site tRNA.UniRule annotation4 Publications

Protein-protein interaction databases

STRINGi272569.rrnAC3514

Structurei

Secondary structure

192
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliP32411
SMRiP32411
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP32411

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL42 family.UniRule annotation

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri11 – 74C4-typeCuratedAdd BLAST64

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiarCOG04109 Archaea
COG1631 LUCA
HOGENOMiHOG000224988
KOiK02929
OMAiYGGFPRP
OrthoDBiPOG093Z0JPZ

Family and domain databases

HAMAPiMF_01476 Ribosomal_L44e, 1 hit
InterProiView protein in InterPro
IPR000552 Ribosomal_L44e
IPR011332 Ribosomal_zn-bd
PfamiView protein in Pfam
PF00935 Ribosomal_L44, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002841 Ribosomal_L44e, 1 hit
SUPFAMiSSF57829 SSF57829, 1 hit
PROSITEiView protein in PROSITE
PS01172 RIBOSOMAL_L44E, 1 hit

Sequencei

Sequence statusi: Complete.

P32411-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MQMPRRFNTY CPHCNEHQEH EVEKVRSGRQ TGMKWIDRQR ERNSGIGNDG
60 70 80 90
KFSKVPGGDK PTKKTDLKYR CGECGKAHLR EGWRAGRLEF QE
Length:92
Mass (Da):10,791
Last modified:October 1, 1993 - v1
Checksum:i14197AA6AE7AC07A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596297 Genomic DNA Translation: AAV48183.1
PIRiS33790
RefSeqiWP_004593654.1, NC_006396.1

Genome annotation databases

EnsemblBacteriaiAAV48183; AAV48183; rrnAC3514
GeneIDi35219364
KEGGihma:rrnAC3514
PATRICifig|272569.17.peg.4020

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596297 Genomic DNA Translation: AAV48183.1
PIRiS33790
RefSeqiWP_004593654.1, NC_006396.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FFKX-ray2.40Z1-92[»]
1JJ2X-ray2.4021-92[»]
1K73X-ray3.0141-92[»]
1K8AX-ray3.0041-92[»]
1K9MX-ray3.0041-92[»]
1KC8X-ray3.0141-92[»]
1KD1X-ray3.0041-92[»]
1KQSX-ray3.1021-92[»]
1M1KX-ray3.2041-92[»]
1M90X-ray2.8041-92[»]
1N8RX-ray3.0041-92[»]
1NJIX-ray3.0041-92[»]
1Q7YX-ray3.2041-92[»]
1Q81X-ray2.9541-92[»]
1Q82X-ray2.9841-92[»]
1Q86X-ray3.0041-92[»]
1QVFX-ray3.1021-92[»]
1QVGX-ray2.9021-92[»]
1S72X-ray2.4031-92[»]
1VQ4X-ray2.7031-92[»]
1VQ5X-ray2.6031-92[»]
1VQ6X-ray2.7031-92[»]
1VQ7X-ray2.5031-92[»]
1VQ8X-ray2.2031-92[»]
1VQ9X-ray2.4031-92[»]
1VQKX-ray2.3031-92[»]
1VQLX-ray2.3031-92[»]
1VQMX-ray2.3031-92[»]
1VQNX-ray2.4031-92[»]
1VQOX-ray2.2031-92[»]
1VQPX-ray2.2531-92[»]
1W2BX-ray3.5021-92[»]
1YHQX-ray2.4031-92[»]
1YI2X-ray2.6531-92[»]
1YIJX-ray2.6031-92[»]
1YITX-ray2.8031-92[»]
1YJ9X-ray2.9031-92[»]
1YJNX-ray3.0031-92[»]
1YJWX-ray2.9031-92[»]
2OTJX-ray2.9031-92[»]
2OTLX-ray2.7031-92[»]
2QA4X-ray3.0031-92[»]
2QEXX-ray2.9031-92[»]
3CC2X-ray2.4031-92[»]
3CC4X-ray2.7031-92[»]
3CC7X-ray2.7031-92[»]
3CCEX-ray2.7531-92[»]
3CCJX-ray2.7031-92[»]
3CCLX-ray2.9031-92[»]
3CCMX-ray2.5531-92[»]
3CCQX-ray2.9031-92[»]
3CCRX-ray3.0031-92[»]
3CCSX-ray2.9531-92[»]
3CCUX-ray2.8031-92[»]
3CCVX-ray2.9031-92[»]
3CD6X-ray2.7531-92[»]
3CMAX-ray2.8031-92[»]
3CMEX-ray2.9531-92[»]
3CPWX-ray2.7021-92[»]
3CXCX-ray3.0021-92[»]
3G4SX-ray3.2031-92[»]
3G6EX-ray2.7031-92[»]
3G71X-ray2.8531-92[»]
3I55X-ray3.1131-92[»]
3I56X-ray2.9031-92[»]
3OW2X-ray2.7021-92[»]
4ADXelectron microscopy6.6031-92[»]
4V9FX-ray2.4031-92[»]
ProteinModelPortaliP32411
SMRiP32411
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272569.rrnAC3514

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV48183; AAV48183; rrnAC3514
GeneIDi35219364
KEGGihma:rrnAC3514
PATRICifig|272569.17.peg.4020

Phylogenomic databases

eggNOGiarCOG04109 Archaea
COG1631 LUCA
HOGENOMiHOG000224988
KOiK02929
OMAiYGGFPRP
OrthoDBiPOG093Z0JPZ

Miscellaneous databases

EvolutionaryTraceiP32411

Family and domain databases

HAMAPiMF_01476 Ribosomal_L44e, 1 hit
InterProiView protein in InterPro
IPR000552 Ribosomal_L44e
IPR011332 Ribosomal_zn-bd
PfamiView protein in Pfam
PF00935 Ribosomal_L44, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002841 Ribosomal_L44e, 1 hit
SUPFAMiSSF57829 SSF57829, 1 hit
PROSITEiView protein in PROSITE
PS01172 RIBOSOMAL_L44E, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRL44E_HALMA
AccessioniPrimary (citable) accession number: P32411
Secondary accession number(s): Q5UX20
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 1, 1993
Last sequence update: October 1, 1993
Last modified: October 10, 2018
This is version 115 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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