UniProtKB - P31463 (YIDZ_ECOLI)
Protein
HTH-type transcriptional regulator YidZ
Gene
yidZ
Organism
Escherichia coli (strain K12)
Status
Functioni
Involved in anaerobic NO protection.
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
DNA bindingi | 25 – 44 | H-T-H motifBy similarityAdd BLAST | 20 |
GO - Molecular functioni
- DNA binding Source: UniProtKB-KW
- DNA-binding transcription factor activity Source: UniProtKB-UniRule
GO - Biological processi
- regulation of transcription, DNA-templated Source: GO_Central
- transcription, DNA-templated Source: EcoCyc
Keywordsi
Molecular function | DNA-binding |
Biological process | Transcription, Transcription regulation |
Enzyme and pathway databases
BioCyci | EcoCyc:EG11721-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: HTH-type transcriptional regulator YidZ |
Gene namesi | Name:yidZ Ordered Locus Names:b3711, JW3689 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000105801 | 1 – 319 | HTH-type transcriptional regulator YidZAdd BLAST | 319 |
Proteomic databases
PaxDbi | P31463 |
PRIDEi | P31463 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 4262597, 8 interactors |
DIPi | DIP-12458N |
IntActi | P31463, 2 interactors |
STRINGi | 511145.b3711 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 8 – 65 | HTH lysR-typeAdd BLAST | 58 |
Sequence similaritiesi
Belongs to the LysR transcriptional regulatory family.Curated
Phylogenomic databases
eggNOGi | COG0583, Bacteria |
HOGENOMi | CLU_039613_39_2_6 |
PhylomeDBi | P31463 |
Family and domain databases
CDDi | cd08417, PBP2_Nitroaromatics_like, 1 hit |
Gene3Di | 1.10.10.10, 1 hit |
HAMAPi | MF_01607, HTH_type_YidZ, 1 hit |
InterProi | View protein in InterPro IPR005119, LysR_subst-bd IPR000847, Tscrpt_reg_HTH_LysR IPR023746, Tscrpt_reg_YidZ IPR036388, WH-like_DNA-bd_sf IPR036390, WH_DNA-bd_sf IPR037402, YidZ_PBP2 |
Pfami | View protein in Pfam PF00126, HTH_1, 1 hit PF03466, LysR_substrate, 1 hit |
SUPFAMi | SSF46785, SSF46785, 1 hit |
PROSITEi | View protein in PROSITE PS50931, HTH_LYSR, 1 hit |
i Sequence
Sequence statusi: Complete.
P31463-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKKSITTLDL NLLLCLQLLM QERSVTKAAK RINVTPSAVS KSLAKLRAWF
60 70 80 90 100
DDPLFVNSPL GLSPTPLMVS MEQNLAEWMQ MSNLLLDKPH HQTPRGLKFE
110 120 130 140 150
LAAESPLMMI MLNALSKQIY QRYPQATIKL RNWDYDSLDA ITRGEVDIGF
160 170 180 190 200
SGRESHPRSR ELLSSLPLAI DYEVLFSDVP CVWLRKDHPA LHQTWNLDTF
210 220 230 240 250
LRYPHISICW EQSDTWALDN VLQELGRERT IAMSLPEFEQ SLFMAAQPDN
260 270 280 290 300
LLLATAPRYC QYYNQLHQLP LVALPLPFDE SQQKKLEVPF TLLWHKRNSH
310
NPKIVWLRET IKNLYASMA
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | L10328 Genomic DNA Translation: AAA62062.1 U00096 Genomic DNA Translation: AAC76734.1 AP009048 Genomic DNA Translation: BAE77579.1 |
PIRi | H65173 |
RefSeqi | NP_418167.1, NC_000913.3 WP_001311238.1, NZ_SSZK01000035.1 |
Genome annotation databases
EnsemblBacteriai | AAC76734; AAC76734; b3711 BAE77579; BAE77579; BAE77579 |
GeneIDi | 57729030 948227 |
KEGGi | ecj:JW3689 eco:b3711 |
PATRICi | fig|1411691.4.peg.2990 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | L10328 Genomic DNA Translation: AAA62062.1 U00096 Genomic DNA Translation: AAC76734.1 AP009048 Genomic DNA Translation: BAE77579.1 |
PIRi | H65173 |
RefSeqi | NP_418167.1, NC_000913.3 WP_001311238.1, NZ_SSZK01000035.1 |
3D structure databases
SMRi | P31463 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 4262597, 8 interactors |
DIPi | DIP-12458N |
IntActi | P31463, 2 interactors |
STRINGi | 511145.b3711 |
Proteomic databases
PaxDbi | P31463 |
PRIDEi | P31463 |
Protocols and materials databases
DNASUi | 948227 |
Genome annotation databases
EnsemblBacteriai | AAC76734; AAC76734; b3711 BAE77579; BAE77579; BAE77579 |
GeneIDi | 57729030 948227 |
KEGGi | ecj:JW3689 eco:b3711 |
PATRICi | fig|1411691.4.peg.2990 |
Organism-specific databases
EchoBASEi | EB1672 |
Phylogenomic databases
eggNOGi | COG0583, Bacteria |
HOGENOMi | CLU_039613_39_2_6 |
PhylomeDBi | P31463 |
Enzyme and pathway databases
BioCyci | EcoCyc:EG11721-MONOMER |
Miscellaneous databases
PROi | PR:P31463 |
Family and domain databases
CDDi | cd08417, PBP2_Nitroaromatics_like, 1 hit |
Gene3Di | 1.10.10.10, 1 hit |
HAMAPi | MF_01607, HTH_type_YidZ, 1 hit |
InterProi | View protein in InterPro IPR005119, LysR_subst-bd IPR000847, Tscrpt_reg_HTH_LysR IPR023746, Tscrpt_reg_YidZ IPR036388, WH-like_DNA-bd_sf IPR036390, WH_DNA-bd_sf IPR037402, YidZ_PBP2 |
Pfami | View protein in Pfam PF00126, HTH_1, 1 hit PF03466, LysR_substrate, 1 hit |
SUPFAMi | SSF46785, SSF46785, 1 hit |
PROSITEi | View protein in PROSITE PS50931, HTH_LYSR, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YIDZ_ECOLI | |
Accessioni | P31463Primary (citable) accession number: P31463 Secondary accession number(s): Q2M827 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | July 1, 1993 |
Last sequence update: | July 1, 1993 | |
Last modified: | February 10, 2021 | |
This is version 154 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families