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Protein

Photosystem I reaction center subunit II, chloroplastic

Gene

psaD

Organism
Nicotiana sylvestris (Wood tobacco) (South American tobacco)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

PsaD can form complexes with ferredoxin and ferredoxin-oxidoreductase in photosystem I (PS I) reaction center. PSAD may encode the ferredoxin-docking protein.

GO - Biological processi

Keywordsi

Biological processPhotosynthesis

Names & Taxonomyi

Protein namesi
Recommended name:
Photosystem I reaction center subunit II, chloroplastic
Alternative name(s):
Photosystem I 20 kDa subunit
Short name:
PSI-D
Gene namesi
Name:psaD
OrganismiNicotiana sylvestris (Wood tobacco) (South American tobacco)
Taxonomic identifieri4096 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeNicotianoideaeNicotianeaeNicotiana
Proteomesi
  • UP000189701 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Membrane, Photosystem I, Plastid, Thylakoid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 48ChloroplastBy similarityAdd BLAST48
ChainiPRO_000002937649 – 204Photosystem I reaction center subunit II, chloroplasticAdd BLAST156

Proteomic databases

PRIDEiP29302

Structurei

3D structure databases

ProteinModelPortaliP29302
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PsaD family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

KOiK02692

Family and domain databases

InterProiView protein in InterPro
IPR003685 PsaD
IPR036579 PsaD_sf
PANTHERiPTHR31982 PTHR31982, 1 hit
PfamiView protein in Pfam
PF02531 PsaD, 1 hit
SUPFAMiSSF64234 SSF64234, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P29302-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAMATQASLF TPALSAPKSS APWKQSLASF SPKQLKSTVS APRPIRAMAE
60 70 80 90 100
EAATKEAEAP VGFTPPQLDP NTPSPIFGGS TGGLLRKAQV EEFYVITWES
110 120 130 140 150
PKEQIFEMPT GGAAIMREGA NLLKLARKEQ CLALGTRLRS KYKINYRFYR
160 170 180 190 200
VFPNGEVQYL HPKDGVYPEK VNAGRQGVGQ NFRSIGKNKS PIEVKFTGKQ

VYDL
Length:204
Mass (Da):22,424
Last modified:December 1, 1992 - v1
Checksum:i87D4CC7248569478
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X60008 mRNA Translation: CAA42623.1
PIRiS18348
RefSeqiNP_001299579.1, NM_001312650.1
XP_009795521.1, XM_009797219.1

Genome annotation databases

GeneIDi104242194
KEGGinsy:104242194

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X60008 mRNA Translation: CAA42623.1
PIRiS18348
RefSeqiNP_001299579.1, NM_001312650.1
XP_009795521.1, XM_009797219.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1YO9model-D1-204[»]
ProteinModelPortaliP29302
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiP29302

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi104242194
KEGGinsy:104242194

Phylogenomic databases

KOiK02692

Family and domain databases

InterProiView protein in InterPro
IPR003685 PsaD
IPR036579 PsaD_sf
PANTHERiPTHR31982 PTHR31982, 1 hit
PfamiView protein in Pfam
PF02531 PsaD, 1 hit
SUPFAMiSSF64234 SSF64234, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiPSAD_NICSY
AccessioniPrimary (citable) accession number: P29302
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 1, 1992
Last sequence update: December 1, 1992
Last modified: February 28, 2018
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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Main funding by: National Institutes of Health

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