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Protein

Chlorophyll a-b binding protein CP24 10A, chloroplastic

Gene

CAP10A

Organism
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processPhotosynthesis
LigandChlorophyll, Chromophore

Names & Taxonomyi

Protein namesi
Recommended name:
Chlorophyll a-b binding protein CP24 10A, chloroplastic
Short name:
CAB-10A
Short name:
LHCP
Gene namesi
Name:CAP10A
OrganismiSolanum lycopersicum (Tomato) (Lycopersicon esculentum)
Taxonomic identifieri4081 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanumLycopersicon
Proteomesi
  • UP000004994 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei106 – 126HelicalSequence analysisAdd BLAST21
Transmembranei134 – 154HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Chloroplast, Membrane, Photosystem II, Plastid, Thylakoid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_0000007811? – 256Chlorophyll a-b binding protein CP24 10A, chloroplastic
Transit peptidei1 – ?ChloroplastSequence analysis

Proteomic databases

PaxDbiP27524

Interactioni

Protein-protein interaction databases

STRINGi4081.Solyc01g105030.2.1

Structurei

3D structure databases

ProteinModelPortaliP27524
SMRiP27524
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ELIP/psbS family.Curated

Keywords - Domaini

Transit peptide, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IG6Y Eukaryota
ENOG410ZGWX LUCA
InParanoidiP27524
KOiK08917
OMAiWVDFFDP
OrthoDBiEOG09360J56

Family and domain databases

Gene3Di1.10.3460.10, 1 hit
InterProiView protein in InterPro
IPR001344 Chloro_AB-bd_pln
IPR022796 Chloroa_b-bind
IPR023329 Chlorophyll_a/b-bd_dom_sf
PANTHERiPTHR21649 PTHR21649, 1 hit
PfamiView protein in Pfam
PF00504 Chloroa_b-bind, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P27524-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATTSAAVLN GLSSSFLTGG NKSQALLAAP LAARVGGAAT PKRFTVLAAA
60 70 80 90 100
AKKSWIPAVR GGGNLVDPEW LDGSLPGDYG FDPLGLGKDP AFLKWYREAE
110 120 130 140 150
LIHGRWAMAA VLGIFVGQAW SGIPWFEAGA DPGAIAPFSF GTLLGTQLIL
160 170 180 190 200
MGWVESKRWV DFFDPDSQSV EWATPWSKTA ENFANFTGEQ GYPGGKFFDP
210 220 230 240 250
LALAGTLNNG VYVPDTEKLE RLKVAEIKHA RLAMLAMLIF YFEAGQGKTP

LGALGL
Length:256
Mass (Da):27,253
Last modified:August 1, 1992 - v1
Checksum:iBD397BEF9E48300A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M32605 Genomic DNA Translation: AAA34143.1
PIRiS11877
RefSeqiNP_001296324.1, NM_001309395.1
UniGeneiLes.19928

Genome annotation databases

EnsemblPlantsiSolyc01g105030.2.1; Solyc01g105030.2.1; Solyc01g105030.2
GeneIDi101256629
GrameneiSolyc01g105030.2.1; Solyc01g105030.2.1; Solyc01g105030.2
KEGGisly:101256629

Similar proteinsi

Entry informationi

Entry nameiCB4A_SOLLC
AccessioniPrimary (citable) accession number: P27524
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 1, 1992
Last sequence update: August 1, 1992
Last modified: March 28, 2018
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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