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Protein

Lipopolysaccharide core biosynthesis protein RfaZ

Gene

rfaZ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Pathwayi: LPS core biosynthesis

This protein is involved in the pathway LPS core biosynthesis, which is part of Bacterial outer membrane biogenesis.
View all proteins of this organism that are known to be involved in the pathway LPS core biosynthesis and in Bacterial outer membrane biogenesis.

GO - Biological processi

  • lipopolysaccharide core region biosynthetic process Source: EcoCyc

Keywordsi

Biological processLipopolysaccharide biosynthesis

Enzyme and pathway databases

BioCyciEcoCyc:EG11426-MONOMER
MetaCyc:EG11426-MONOMER
UniPathwayiUPA00958

Protein family/group databases

CAZyiGT73 Glycosyltransferase Family 73

Names & Taxonomyi

Protein namesi
Recommended name:
Lipopolysaccharide core biosynthesis protein RfaZ
Gene namesi
Name:rfaZ
Ordered Locus Names:b3624, JW3599
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11426 rfaZ

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000972901 – 283Lipopolysaccharide core biosynthesis protein RfaZAdd BLAST283

Proteomic databases

PaxDbiP27241
PRIDEiP27241

Interactioni

Protein-protein interaction databases

BioGridi4261610, 243 interactors
IntActiP27241, 7 interactors
STRINGi316385.ECDH10B_3806

Structurei

3D structure databases

ProteinModelPortaliP27241
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108QD8 Bacteria
ENOG410XR3T LUCA
HOGENOMiHOG000028345
KOiK12981
OMAiKPFFYVC

Family and domain databases

InterProiView protein in InterPro
IPR031026 WaaZ_KDO_III
TIGRFAMsiTIGR04437 WaaZ_KDO_III, 1 hit

Sequencei

Sequence statusi: Complete.

P27241-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNIRYIDKK DVENLIENKI SDDVIIFLSG PTSQKTPLSV LRTKDIIAVN
60 70 80 90 100
GSAQYLLSNN IVPFIYVLTD VRFLHQRRDD FYKFSQRSRY TIVNVDVYEH
110 120 130 140 150
ASKEDKLYIL QNCLVLRSFY RREKGGFIKK IKFNILRQIH KELLISVPLS
160 170 180 190 200
KKGRLVGFCK DISLGYCSCH TIAFAAIQIA YSLKYARIIC SGLDLTGSCS
210 220 230 240 250
RFYDENKNPM PSELSRDLFK ILPFFRFMHD NVKDINIYNL SDDTAISYDV
260 270 280
IPFIKLQDIS AEESKDMTRK KMQYRTSTDS YAN
Length:283
Mass (Da):32,920
Last modified:October 1, 1994 - v2
Checksum:i7441DE0DEF192580
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti58S → G in AAA24522 (PubMed:1624462).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M95398 Genomic DNA Translation: AAA24522.1
U00039 Genomic DNA Translation: AAB18601.1
U00096 Genomic DNA Translation: AAC76648.1
AP009048 Genomic DNA Translation: BAE77668.1
PIRiS47845
RefSeqiNP_418081.1, NC_000913.3
WP_000790279.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC76648; AAC76648; b3624
BAE77668; BAE77668; BAE77668
GeneIDi948146
KEGGiecj:JW3599
eco:b3624
PATRICifig|1411691.4.peg.3082

Similar proteinsi

Entry informationi

Entry nameiRFAZ_ECOLI
AccessioniPrimary (citable) accession number: P27241
Secondary accession number(s): Q2M7T8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 1, 1992
Last sequence update: October 1, 1994
Last modified: March 28, 2018
This is version 107 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways

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