UniProtKB - P27238 (YFED_ECOLI)
Protein
Uncharacterized protein YfeD
Gene
yfeD
Organism
Escherichia coli (strain K12)
Status
Functioni
GO - Molecular functioni
- DNA binding Source: InterPro
Enzyme and pathway databases
BioCyci | EcoCyc:EG11432-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: Uncharacterized protein YfeD |
Gene namesi | Name:yfeD Ordered Locus Names:b2399, JW2394 |
Organismi | Escherichia coli (strain K12) |
Taxonomic identifieri | 83333 [NCBI] |
Taxonomic lineagei | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › |
Proteomesi |
|
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000169220 | 1 – 130 | Uncharacterized protein YfeDAdd BLAST | 130 |
Proteomic databases
jPOSTi | P27238 |
PaxDbi | P27238 |
PRIDEi | P27238 |
Interactioni
Protein-protein interaction databases
BioGRIDi | 4260571, 9 interactors |
DIPi | DIP-12013N |
IntActi | P27238, 5 interactors |
STRINGi | 511145.b2399 |
Family & Domainsi
Phylogenomic databases
eggNOGi | COG3415, Bacteria |
HOGENOMi | CLU_168146_0_0_6 |
Family and domain databases
CDDi | cd00093, HTH_XRE, 1 hit |
Gene3Di | 1.10.260.40, 1 hit |
InterProi | View protein in InterPro IPR001387, Cro/C1-type_HTH IPR009061, DNA-bd_dom_put_sf IPR010749, DUF1323 IPR010982, Lambda_DNA-bd_dom_sf |
Pfami | View protein in Pfam PF07037, DUF1323, 1 hit |
SUPFAMi | SSF46955, SSF46955, 1 hit |
i Sequence
Sequence statusi: Complete.
P27238-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKRLRNKMTT EELAECLGVA KQTVNRWIRE KGWKTEKFPG VKGGRARLIL
60 70 80 90 100
VDTQVCEFIQ NTPAFHNTPM LMEAEERIAE YAPGARAPAY RQIINAIDNM
110 120 130
TDIEQEKVAQ FLSREGIRNF LARLDIDESA
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | M13687 Genomic DNA Translation: AAA65716.1 X63976 Genomic DNA Translation: CAA45392.1 U00096 Genomic DNA Translation: AAC75456.3 AP009048 Genomic DNA Translation: BAA16271.1 |
PIRi | S11409 |
RefSeqi | NP_416898.3, NC_000913.3 WP_000826503.1, NZ_CP047127.1 |
Genome annotation databases
EnsemblBacteriai | AAC75456; AAC75456; b2399 BAA16271; BAA16271; BAA16271 |
GeneIDi | 946865 |
KEGGi | ecj:JW2394 eco:b2399 |
PATRICi | fig|511145.12.peg.2494 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | M13687 Genomic DNA Translation: AAA65716.1 X63976 Genomic DNA Translation: CAA45392.1 U00096 Genomic DNA Translation: AAC75456.3 AP009048 Genomic DNA Translation: BAA16271.1 |
PIRi | S11409 |
RefSeqi | NP_416898.3, NC_000913.3 WP_000826503.1, NZ_CP047127.1 |
3D structure databases
SMRi | P27238 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 4260571, 9 interactors |
DIPi | DIP-12013N |
IntActi | P27238, 5 interactors |
STRINGi | 511145.b2399 |
Proteomic databases
jPOSTi | P27238 |
PaxDbi | P27238 |
PRIDEi | P27238 |
Genome annotation databases
EnsemblBacteriai | AAC75456; AAC75456; b2399 BAA16271; BAA16271; BAA16271 |
GeneIDi | 946865 |
KEGGi | ecj:JW2394 eco:b2399 |
PATRICi | fig|511145.12.peg.2494 |
Organism-specific databases
EchoBASEi | EB1402 |
Phylogenomic databases
eggNOGi | COG3415, Bacteria |
HOGENOMi | CLU_168146_0_0_6 |
Enzyme and pathway databases
BioCyci | EcoCyc:EG11432-MONOMER |
Miscellaneous databases
PROi | PR:P27238 |
Family and domain databases
CDDi | cd00093, HTH_XRE, 1 hit |
Gene3Di | 1.10.260.40, 1 hit |
InterProi | View protein in InterPro IPR001387, Cro/C1-type_HTH IPR009061, DNA-bd_dom_put_sf IPR010749, DUF1323 IPR010982, Lambda_DNA-bd_dom_sf |
Pfami | View protein in Pfam PF07037, DUF1323, 1 hit |
SUPFAMi | SSF46955, SSF46955, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | YFED_ECOLI | |
Accessioni | P27238Primary (citable) accession number: P27238 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | August 1, 1992 |
Last sequence update: | November 24, 2009 | |
Last modified: | December 2, 2020 | |
This is version 130 of the entry and version 3 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |