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Protein

Flavoprotein-like protein YCP4

Gene

YCP4

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Miscellaneous

Present with 14600 molecules/cell in log phase SD medium.1 Publication

GO - Molecular functioni

  • electron transfer activity Source: SGD
  • FMN binding Source: GO_Central
  • NAD(P)H dehydrogenase (quinone) activity Source: GO_Central

Enzyme and pathway databases

BioCyciYEAST:G3O-29323-MONOMER

Protein family/group databases

CAZyiAA6 Auxiliary Activities 6

Names & Taxonomyi

Protein namesi
Recommended name:
Flavoprotein-like protein YCP4
Gene namesi
Name:YCP4
Ordered Locus Names:YCR004C
ORF Names:YCR042, YCR4C
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
Proteomesi
  • UP000002311 Componenti: Chromosome III

Organism-specific databases

EuPathDBiFungiDB:YCR004C
SGDiS000000597 YCP4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Membrane, Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002007681 – 244Flavoprotein-like protein YCP4Add BLAST244
PropeptideiPRO_0000366191245 – 247Removed in mature formSequence analysis3

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Lipidationi243S-palmitoyl cysteine1 Publication1
Modified residuei244Cysteine methyl esterSequence analysis1
Lipidationi244S-farnesyl cysteineSequence analysis1

Keywords - PTMi

Lipoprotein, Methylation, Palmitate, Prenylation

Proteomic databases

MaxQBiP25349
PaxDbiP25349
PRIDEiP25349

PTM databases

iPTMnetiP25349
SwissPalmiP25349

Interactioni

Binary interactionsi

Show more details

Protein-protein interaction databases

BioGridi30982, 52 interactors
DIPiDIP-1781N
IntActiP25349, 25 interactors
MINTiP25349
STRINGi4932.YCR004C

Structurei

3D structure databases

ProteinModelPortaliP25349
SMRiP25349
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 193Flavodoxin-likePROSITE-ProRule annotationAdd BLAST190

Sequence similaritiesi

Belongs to the WrbA family.Curated

Phylogenomic databases

GeneTreeiENSGT00390000012243
HOGENOMiHOG000030539
InParanoidiP25349
OMAiHGSTRKL
OrthoDBiEOG092C4TWB

Family and domain databases

Gene3Di3.40.50.360, 1 hit
InterProiView protein in InterPro
IPR008254 Flavodoxin/NO_synth
IPR029039 Flavoprotein-like_sf
IPR010089 Flavoprotein_WrbA-like
IPR005025 FMN_Rdtase-like
PfamiView protein in Pfam
PF03358 FMN_red, 1 hit
SUPFAMiSSF52218 SSF52218, 1 hit
TIGRFAMsiTIGR01755 flav_wrbA, 1 hit
PROSITEiView protein in PROSITE
PS50902 FLAVODOXIN_LIKE, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P25349-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKIAIITYS TYGHIDVLAQ AVKKGVEAAG GKADIYRVEE TLPDEVLTKM
60 70 80 90 100
NAPQKPEDIP VATEKTLLEY DAFLFGVPTR FGNLPAQWSA FWDKTGGLWA
110 120 130 140 150
KGSLNGKAAG IFVSTSSYGG GQESTVKACL SYLAHHGIIF LPLGYKNSFA
160 170 180 190 200
ELASIEEVHG GSPWGAGTLA GPDGSRTASP LELRIAEIQG KTFYETAKKL
210 220 230 240
FPAKEAKPST EKKTTTSDAA KRQTKPAAAT TAEKKEDKGL LSCCTVM
Length:247
Mass (Da):26,350
Last modified:May 1, 1992 - v1
Checksum:i92AAD81C0691DE5D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z11113 Genomic DNA Translation: CAA77443.1
X59720 Genomic DNA Translation: CAA42341.1
BK006937 Genomic DNA Translation: DAA07483.1
PIRiS26733
RefSeqiNP_009930.1, NM_001178717.1

Genome annotation databases

EnsemblFungiiCAA42341; CAA42341; CAA42341
YCR004C; YCR004C; YCR004C
GeneIDi850360
KEGGisce:YCR004C

Similar proteinsi

Entry informationi

Entry nameiYCP4_YEAST
AccessioniPrimary (citable) accession number: P25349
Secondary accession number(s): D6VR14
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 1, 1992
Last sequence update: May 1, 1992
Last modified: July 18, 2018
This is version 153 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  3. Yeast chromosome III
    Yeast (Saccharomyces cerevisiae) chromosome III: entries and gene names

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