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Protein

Sodium-dependent dopamine transporter

Gene

Slc6a3

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Amine transporter. Terminates the action of dopamine by its high affinity sodium-dependent reuptake into presynaptic terminals.4 Publications

Miscellaneous

This protein is the target of psychomotor stimulants such as amphetamines or cocaine.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi75Sodium 1; via carbonyl oxygenBy similarity1
Metal bindingi77Sodium 2; via carbonyl oxygenBy similarity1
Metal bindingi78Sodium 1; via carbonyl oxygenBy similarity1
Metal bindingi82Sodium 2By similarity1
Sitei105Contributes to high-affinity binding to cocaineBy similarity1
Metal bindingi320Sodium 2By similarity1
Metal bindingi352Sodium 2By similarity1
Metal bindingi417Sodium 1; via carbonyl oxygenBy similarity1
Metal bindingi420Sodium 1By similarity1
Metal bindingi421Sodium 1By similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processNeurotransmitter transport, Symport, Transport
LigandMetal-binding, Sodium

Enzyme and pathway databases

ReactomeiR-RNO-379401 Dopamine clearance from the synaptic cleft
R-RNO-442660 Na+/Cl- dependent neurotransmitter transporters

Names & Taxonomyi

Protein namesi
Recommended name:
Sodium-dependent dopamine transporter
Short name:
DA transporter
Short name:
DAT
Alternative name(s):
Solute carrier family 6 member 3
Gene namesi
Name:Slc6a3
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi3715 Slc6a3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 68CytoplasmicSequence analysisAdd BLAST68
Transmembranei69 – 89Helical; Name=1Sequence analysisAdd BLAST21
Transmembranei96 – 116Helical; Name=2Sequence analysisAdd BLAST21
Transmembranei140 – 160Helical; Name=3Sequence analysisAdd BLAST21
Topological domaini161 – 236ExtracellularSequence analysisAdd BLAST76
Transmembranei237 – 255Helical; Name=4Sequence analysisAdd BLAST19
Transmembranei264 – 281Helical; Name=5Sequence analysisAdd BLAST18
Transmembranei317 – 334Helical; Name=6Sequence analysisAdd BLAST18
Transmembranei346 – 367Helical; Name=7Sequence analysisAdd BLAST22
Transmembranei400 – 419Helical; Name=8Sequence analysisAdd BLAST20
Transmembranei446 – 464Helical; Name=9Sequence analysisAdd BLAST19
Transmembranei480 – 500Helical; Name=10Sequence analysisAdd BLAST21
Transmembranei521 – 540Helical; Name=11Sequence analysisAdd BLAST20
Transmembranei559 – 577Helical; Name=12Sequence analysisAdd BLAST19
Topological domaini578 – 619CytoplasmicSequence analysisAdd BLAST42

Keywords - Cellular componenti

Cell membrane, Membrane

Pathology & Biotechi

Chemistry databases

ChEMBLiCHEMBL338
GuidetoPHARMACOLOGYi927

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002147541 – 619Sodium-dependent dopamine transporterAdd BLAST619

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi180 ↔ 189By similarity
Glycosylationi181N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi188N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi196N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi204N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi305InterchainBy similarity

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiP23977
PRIDEiP23977

PTM databases

iPTMnetiP23977
PhosphoSitePlusiP23977
SwissPalmiP23977

Expressioni

Gene expression databases

BgeeiENSRNOG00000017302 Expressed in 4 organ(s), highest expression level in brain
GenevisibleiP23977 RN

Interactioni

Subunit structurei

Homooligomer; disulfide-linked (By similarity). Interacts with PRKCABP and TGFB1I1. Interacts (via N-terminus) with SYNGR3 (via N-terminus). Interacts with SLC18A2. Interacts with TOR1A (ATP-bound); TOR1A regulates SLC6A3 subcellular location (By similarity).By similarity

GO - Molecular functioni

Protein-protein interaction databases

BioGridi247007, 5 interactors
IntActiP23977, 2 interactors
MINTiP23977
STRINGi10116.ENSRNOP00000047272

Chemistry databases

BindingDBiP23977

Structurei

3D structure databases

ProteinModelPortaliP23977
SMRiP23977
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni560 – 589Interaction with TGFB1I1By similarityAdd BLAST30

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG3659 Eukaryota
COG0733 LUCA
GeneTreeiENSGT00760000118857
HOGENOMiHOG000116406
HOVERGENiHBG071421
InParanoidiP23977
KOiK05036
OMAiPLTFAKM
OrthoDBiEOG091G08PX
PhylomeDBiP23977
TreeFamiTF343812

Family and domain databases

InterProiView protein in InterPro
IPR000175 Na/ntran_symport
IPR002436 Na/ntran_symport_dopamine
IPR037272 SNS_sf
PANTHERiPTHR11616 PTHR11616, 1 hit
PfamiView protein in Pfam
PF00209 SNF, 1 hit
PRINTSiPR01202 DOPTRANSPORT
PR00176 NANEUSMPORT
SUPFAMiSSF161070 SSF161070, 1 hit
PROSITEiView protein in PROSITE
PS00610 NA_NEUROTRAN_SYMP_1, 1 hit
PS00754 NA_NEUROTRAN_SYMP_2, 1 hit
PS50267 NA_NEUROTRAN_SYMP_3, 1 hit

Sequencei

Sequence statusi: Complete.

P23977-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSKSKCSVGP MSSVVAPAKE SNAVGPREVE LILVKEQNGV QLTNSTLINP
60 70 80 90 100
PQTPVEAQER ETWSKKIDFL LSVIGFAVDL ANVWRFPYLC YKNGGGAFLV
110 120 130 140 150
PYLLFMVIAG MPLFYMELAL GQFNREGAAG VWKICPVLKG VGFTVILISF
160 170 180 190 200
YVGFFYNVII AWALHYFFSS FTMDLPWIHC NNTWNSPNCS DAHASNSSDG
210 220 230 240 250
LGLNDTFGTT PAAEYFERGV LHLHQSRGID DLGPPRWQLT ACLVLVIVLL
260 270 280 290 300
YFSLWKGVKT SGKVVWITAT MPYVVLTALL LRGVTLPGAM DGIRAYLSVD
310 320 330 340 350
FYRLCEASVW IDAATQVCFS LGVGFGVLIA FSSYNKFTNN CYRDAIITTS
360 370 380 390 400
INSLTSFSSG FVVFSFLGYM AQKHNVPIRD VATDGPGLIF IIYPEAIATL
410 420 430 440 450
PLSSAWAAVF FLMLLTLGID SAMGGMESVI TGLVDEFQLL HRHRELFTLG
460 470 480 490 500
IVLATFLLSL FCVTNGGIYV FTLLDHFAAG TSILFGVLIE AIGVAWFYGV
510 520 530 540 550
QQFSDDIKQM TGQRPNLYWR LCWKLVSPCF LLYVVVVSIV TFRPPHYGAY
560 570 580 590 600
IFPDWANALG WIIATSSMAM VPIYATYKFC SLPGSFREKL AYAITPEKDH
610
QLVDRGEVRQ FTLRHWLLL
Length:619
Mass (Da):68,746
Last modified:March 1, 1992 - v1
Checksum:iDF3A30C981095D24
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti597E → K in AAB21099 (PubMed:1765147).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M80233 mRNA Translation: AAA41100.1
M80570 mRNA Translation: AAA73143.1
S76145 mRNA Translation: AAB21099.1
PIRiI59558
S20346
RefSeqiNP_036826.1, NM_012694.2
UniGeneiRn.10093

Genome annotation databases

EnsembliENSRNOT00000040291; ENSRNOP00000047272; ENSRNOG00000017302
ENSRNOT00000079987; ENSRNOP00000070728; ENSRNOG00000017302
GeneIDi24898
KEGGirno:24898
UCSCiRGD:3715 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M80233 mRNA Translation: AAA41100.1
M80570 mRNA Translation: AAA73143.1
S76145 mRNA Translation: AAB21099.1
PIRiI59558
S20346
RefSeqiNP_036826.1, NM_012694.2
UniGeneiRn.10093

3D structure databases

ProteinModelPortaliP23977
SMRiP23977
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi247007, 5 interactors
IntActiP23977, 2 interactors
MINTiP23977
STRINGi10116.ENSRNOP00000047272

Chemistry databases

BindingDBiP23977
ChEMBLiCHEMBL338
GuidetoPHARMACOLOGYi927

PTM databases

iPTMnetiP23977
PhosphoSitePlusiP23977
SwissPalmiP23977

Proteomic databases

PaxDbiP23977
PRIDEiP23977

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000040291; ENSRNOP00000047272; ENSRNOG00000017302
ENSRNOT00000079987; ENSRNOP00000070728; ENSRNOG00000017302
GeneIDi24898
KEGGirno:24898
UCSCiRGD:3715 rat

Organism-specific databases

CTDi6531
RGDi3715 Slc6a3

Phylogenomic databases

eggNOGiKOG3659 Eukaryota
COG0733 LUCA
GeneTreeiENSGT00760000118857
HOGENOMiHOG000116406
HOVERGENiHBG071421
InParanoidiP23977
KOiK05036
OMAiPLTFAKM
OrthoDBiEOG091G08PX
PhylomeDBiP23977
TreeFamiTF343812

Enzyme and pathway databases

ReactomeiR-RNO-379401 Dopamine clearance from the synaptic cleft
R-RNO-442660 Na+/Cl- dependent neurotransmitter transporters

Miscellaneous databases

PROiPR:P23977

Gene expression databases

BgeeiENSRNOG00000017302 Expressed in 4 organ(s), highest expression level in brain
GenevisibleiP23977 RN

Family and domain databases

InterProiView protein in InterPro
IPR000175 Na/ntran_symport
IPR002436 Na/ntran_symport_dopamine
IPR037272 SNS_sf
PANTHERiPTHR11616 PTHR11616, 1 hit
PfamiView protein in Pfam
PF00209 SNF, 1 hit
PRINTSiPR01202 DOPTRANSPORT
PR00176 NANEUSMPORT
SUPFAMiSSF161070 SSF161070, 1 hit
PROSITEiView protein in PROSITE
PS00610 NA_NEUROTRAN_SYMP_1, 1 hit
PS00754 NA_NEUROTRAN_SYMP_2, 1 hit
PS50267 NA_NEUROTRAN_SYMP_3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiSC6A3_RAT
AccessioniPrimary (citable) accession number: P23977
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 1, 1992
Last sequence update: March 1, 1992
Last modified: November 7, 2018
This is version 143 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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