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Protein

Receptor-type tyrosine-protein phosphatase zeta

Gene

PTPRZ1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Protein tyrosine phosphatase that negatively regulates oligodendrocyte precursor proliferation in the embryonic spinal cord. Required for normal differentiation of the precursor cells into mature, fully myelinating oligodendrocytes. May play a role in protecting oligondendrocytes against apoptosis. May play a role in the establishment of contextual memory, probably via the dephosphorylation of proteins that are part of important signaling cascades (By similarity).By similarity

Caution

Was termed (PubMed:8387522 and PubMed:2170109) RPTPase beta.Curated
The human genome was initially thought to contain 2 genes for PTPRZ: PTPRZ1 (on chr 7) and PTPRZ2 (on chr 1). However, PTPRZ2 probably does not exist and corresponds to PTPRZ1.Curated

Catalytic activityi

Protein tyrosine phosphate + H2O = protein tyrosine + phosphate.PROSITE-ProRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei1901SubstrateBy similarity1
Active sitei1933Phosphocysteine intermediatePROSITE-ProRule annotation1
Binding sitei1977SubstrateBy similarity1
Sitei2223Ancestral active site1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHydrolase, Protein phosphatase

Enzyme and pathway databases

BRENDAi3.1.3.48 2681
ReactomeiR-HSA-449836 Other interleukin signaling
SignaLinkiP23471
SIGNORiP23471

Names & Taxonomyi

Protein namesi
Recommended name:
Receptor-type tyrosine-protein phosphatase zeta (EC:3.1.3.48By similarity)
Short name:
R-PTP-zeta
Alternative name(s):
Protein-tyrosine phosphatase receptor type Z polypeptide 1
Protein-tyrosine phosphatase receptor type Z polypeptide 2
R-PTP-zeta-2
Gene namesi
Name:PTPRZ1
Synonyms:HTPZP2, PTPRZ, PTPRZ2, PTPZ
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 7

Organism-specific databases

EuPathDBiHostDB:ENSG00000106278.11
HGNCiHGNC:9685 PTPRZ1
MIMi176891 gene
604008 gene
neXtProtiNX_P23471

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini25 – 1636ExtracellularSequence analysisAdd BLAST1612
Transmembranei1637 – 1662HelicalSequence analysisAdd BLAST26
Topological domaini1663 – 2315CytoplasmicSequence analysisAdd BLAST653

Keywords - Cellular componenti

Cell membrane, Membrane, Secreted

Pathology & Biotechi

Organism-specific databases

DisGeNETi5803
MalaCardsiPTPRZ1
OpenTargetsiENSG00000106278
PharmGKBiPA34029

Polymorphism and mutation databases

BioMutaiPTPRZ1
DMDMi229485537

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24By similarityAdd BLAST24
ChainiPRO_000002546825 – 2315Receptor-type tyrosine-protein phosphatase zetaAdd BLAST2291

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi56 ↔ 2401 Publication
Glycosylationi105N-linked (GlcNAc...) asparagine1 Publication1
Disulfide bondi133 ↔ 2641 Publication
Glycosylationi134N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi223N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi232N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi324N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi381N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi497N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi501N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi552N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi587O-linked (Xyl...) (chondroitin sulfate) serineSequence analysis1
Glycosylationi602N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi629N-linked (GlcNAc...) asparagineSequence analysis1
Modified residuei637Phosphoserine; alternateBy similarity1
Glycosylationi637O-linked (Xyl...) (chondroitin sulfate) serine; alternateSequence analysis1
Modified residuei639PhosphoserineBy similarity1
Glycosylationi677N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi997O-linked (Xyl...) (chondroitin sulfate) serineSequence analysis1
Glycosylationi1017N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1050N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1082N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1122N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1457N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1549O-linked (Xyl...) (chondroitin sulfate) serineSequence analysis1
Glycosylationi1551O-linked (Xyl...) (chondroitin sulfate) serineSequence analysis1
Glycosylationi1562N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi1618N-linked (GlcNAc...) asparagineSequence analysis1
Modified residuei1684PhosphothreonineBy similarity1
Modified residuei1687PhosphothreonineBy similarity1
Modified residuei2055PhosphoserineCombined sources1

Keywords - PTMi

Disulfide bond, Glycoprotein, Phosphoprotein, Proteoglycan

Proteomic databases

EPDiP23471
PaxDbiP23471
PeptideAtlasiP23471
PRIDEiP23471
ProteomicsDBi54112
54113 [P23471-2]

PTM databases

DEPODiP23471
iPTMnetiP23471
PhosphoSitePlusiP23471

Expressioni

Tissue specificityi

Specifically expressed in the central nervous system, where it is localized in the Purkinje cell layer of the cerebellum, the dentate gyrus, and the subependymal layer of the anterior horn of the lateral ventricle. Developmentally regulated in the brain.1 Publication

Gene expression databases

BgeeiENSG00000106278 Expressed in 176 organ(s), highest expression level in substantia nigra
CleanExiHS_PTPRZ1
GenevisibleiP23471 HS

Organism-specific databases

HPAiCAB025106
HPA015103
HPA071024

Interactioni

Subunit structurei

The carbonic-anhydrase like domain interacts with CNTN1 (contactin) (PubMed:20133774). Interacts with PTN (PubMed:16814777). Interaction with PTN promotes formation of homooligomers; oligomerization impairs phosphatase activity (By similarity).By similarity2 Publications

Binary interactionsi

Protein-protein interaction databases

BioGridi111767, 11 interactors
DIPiDIP-42063N
IntActiP23471, 11 interactors
MINTiP23471
STRINGi9606.ENSP00000377047

Structurei

Secondary structure

12315
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliP23471
SMRiP23471
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP23471

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini36 – 300Alpha-carbonic anhydrasePROSITE-ProRule annotationAdd BLAST265
Domaini314 – 413Fibronectin type-IIIPROSITE-ProRule annotationAdd BLAST100
Domaini1717 – 1992Tyrosine-protein phosphatase 1PROSITE-ProRule annotationAdd BLAST276
Domaini2023 – 2282Tyrosine-protein phosphatase 2PROSITE-ProRule annotationAdd BLAST260

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni1933 – 1939Substrate bindingBy similarity7

Sequence similaritiesi

Keywords - Domaini

Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG4228 Eukaryota
COG3338 LUCA
COG5599 LUCA
GeneTreeiENSGT00760000118900
HOGENOMiHOG000090262
HOVERGENiHBG053760
InParanoidiP23471
KOiK08114
OMAiMMHARSS
OrthoDBiEOG091G018S
PhylomeDBiP23471
TreeFamiTF351978

Family and domain databases

CDDicd00063 FN3, 1 hit
Gene3Di2.60.40.10, 1 hit
3.10.200.10, 1 hit
3.90.190.10, 2 hits
InterProiView protein in InterPro
IPR001148 CA_dom
IPR036398 CA_dom_sf
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR013783 Ig-like_fold
IPR029021 Prot-tyrosine_phosphatase-like
IPR000242 PTPase_domain
IPR016130 Tyr_Pase_AS
IPR003595 Tyr_Pase_cat
IPR000387 TYR_PHOSPHATASE_dom
PfamiView protein in Pfam
PF00194 Carb_anhydrase, 1 hit
PF00041 fn3, 1 hit
PF00102 Y_phosphatase, 2 hits
PRINTSiPR00700 PRTYPHPHTASE
SMARTiView protein in SMART
SM01057 Carb_anhydrase, 1 hit
SM00060 FN3, 1 hit
SM00194 PTPc, 2 hits
SM00404 PTPc_motif, 2 hits
SUPFAMiSSF49265 SSF49265, 1 hit
SSF51069 SSF51069, 1 hit
SSF52799 SSF52799, 2 hits
PROSITEiView protein in PROSITE
PS51144 ALPHA_CA_2, 1 hit
PS50853 FN3, 1 hit
PS00383 TYR_PHOSPHATASE_1, 1 hit
PS50056 TYR_PHOSPHATASE_2, 2 hits
PS50055 TYR_PHOSPHATASE_PTP, 2 hits

Sequences (3)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 3 isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: P23471-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MRILKRFLAC IQLLCVCRLD WANGYYRQQR KLVEEIGWSY TGALNQKNWG
60 70 80 90 100
KKYPTCNSPK QSPINIDEDL TQVNVNLKKL KFQGWDKTSL ENTFIHNTGK
110 120 130 140 150
TVEINLTNDY RVSGGVSEMV FKASKITFHW GKCNMSSDGS EHSLEGQKFP
160 170 180 190 200
LEMQIYCFDA DRFSSFEEAV KGKGKLRALS ILFEVGTEEN LDFKAIIDGV
210 220 230 240 250
ESVSRFGKQA ALDPFILLNL LPNSTDKYYI YNGSLTSPPC TDTVDWIVFK
260 270 280 290 300
DTVSISESQL AVFCEVLTMQ QSGYVMLMDY LQNNFREQQY KFSRQVFSSY
310 320 330 340 350
TGKEEIHEAV CSSEPENVQA DPENYTSLLV TWERPRVVYD TMIEKFAVLY
360 370 380 390 400
QQLDGEDQTK HEFLTDGYQD LGAILNNLLP NMSYVLQIVA ICTNGLYGKY
410 420 430 440 450
SDQLIVDMPT DNPELDLFPE LIGTEEIIKE EEEGKDIEEG AIVNPGRDSA
460 470 480 490 500
TNQIRKKEPQ ISTTTHYNRI GTKYNEAKTN RSPTRGSEFS GKGDVPNTSL
510 520 530 540 550
NSTSQPVTKL ATEKDISLTS QTVTELPPHT VEGTSASLND GSKTVLRSPH
560 570 580 590 600
MNLSGTAESL NTVSITEYEE ESLLTSFKLD TGAEDSSGSS PATSAIPFIS
610 620 630 640 650
ENISQGYIFS SENPETITYD VLIPESARNA SEDSTSSGSE ESLKDPSMEG
660 670 680 690 700
NVWFPSSTDI TAQPDVGSGR ESFLQTNYTE IRVDESEKTT KSFSAGPVMS
710 720 730 740 750
QGPSVTDLEM PHYSTFAYFP TEVTPHAFTP SSRQQDLVST VNVVYSQTTQ
760 770 780 790 800
PVYNGETPLQ PSYSSEVFPL VTPLLLDNQI LNTTPAASSS DSALHATPVF
810 820 830 840 850
PSVDVSFESI LSSYDGAPLL PFSSASFSSE LFRHLHTVSQ ILPQVTSATE
860 870 880 890 900
SDKVPLHASL PVAGGDLLLE PSLAQYSDVL STTHAASETL EFGSESGVLY
910 920 930 940 950
KTLMFSQVEP PSSDAMMHAR SSGPEPSYAL SDNEGSQHIF TVSYSSAIPV
960 970 980 990 1000
HDSVGVTYQG SLFSGPSHIP IPKSSLITPT ASLLQPTHAL SGDGEWSGAS
1010 1020 1030 1040 1050
SDSEFLLPDT DGLTALNISS PVSVAEFTYT TSVFGDDNKA LSKSEIIYGN
1060 1070 1080 1090 1100
ETELQIPSFN EMVYPSESTV MPNMYDNVNK LNASLQETSV SISSTKGMFP
1110 1120 1130 1140 1150
GSLAHTTTKV FDHEISQVPE NNFSVQPTHT VSQASGDTSL KPVLSANSEP
1160 1170 1180 1190 1200
ASSDPASSEM LSPSTQLLFY ETSASFSTEV LLQPSFQASD VDTLLKTVLP
1210 1220 1230 1240 1250
AVPSDPILVE TPKVDKISST MLHLIVSNSA SSENMLHSTS VPVFDVSPTS
1260 1270 1280 1290 1300
HMHSASLQGL TISYASEKYE PVLLKSESSH QVVPSLYSND ELFQTANLEI
1310 1320 1330 1340 1350
NQAHPPKGRH VFATPVLSID EPLNTLINKL IHSDEILTST KSSVTGKVFA
1360 1370 1380 1390 1400
GIPTVASDTF VSTDHSVPIG NGHVAITAVS PHRDGSVTST KLLFPSKATS
1410 1420 1430 1440 1450
ELSHSAKSDA GLVGGGEDGD TDDDGDDDDD DRGSDGLSIH KCMSCSSYRE
1460 1470 1480 1490 1500
SQEKVMNDSD THENSLMDQN NPISYSLSEN SEEDNRVTSV SSDSQTGMDR
1510 1520 1530 1540 1550
SPGKSPSANG LSQKHNDGKE ENDIQTGSAL LPLSPESKAW AVLTSDEESG
1560 1570 1580 1590 1600
SGQGTSDSLN ENETSTDFSF ADTNEKDADG ILAAGDSEIT PGFPQSPTSS
1610 1620 1630 1640 1650
VTSENSEVFH VSEAEASNSS HESRIGLAEG LESEKKAVIP LVIVSALTFI
1660 1670 1680 1690 1700
CLVVLVGILI YWRKCFQTAH FYLEDSTSPR VISTPPTPIF PISDDVGAIP
1710 1720 1730 1740 1750
IKHFPKHVAD LHASSGFTEE FETLKEFYQE VQSCTVDLGI TADSSNHPDN
1760 1770 1780 1790 1800
KHKNRYINIV AYDHSRVKLA QLAEKDGKLT DYINANYVDG YNRPKAYIAA
1810 1820 1830 1840 1850
QGPLKSTAED FWRMIWEHNV EVIVMITNLV EKGRRKCDQY WPADGSEEYG
1860 1870 1880 1890 1900
NFLVTQKSVQ VLAYYTVRNF TLRNTKIKKG SQKGRPSGRV VTQYHYTQWP
1910 1920 1930 1940 1950
DMGVPEYSLP VLTFVRKAAY AKRHAVGPVV VHCSAGVGRT GTYIVLDSML
1960 1970 1980 1990 2000
QQIQHEGTVN IFGFLKHIRS QRNYLVQTEE QYVFIHDTLV EAILSKETEV
2010 2020 2030 2040 2050
LDSHIHAYVN ALLIPGPAGK TKLEKQFQLL SQSNIQQSDY SAALKQCNRE
2060 2070 2080 2090 2100
KNRTSSIIPV ERSRVGISSL SGEGTDYINA SYIMGYYQSN EFIITQHPLL
2110 2120 2130 2140 2150
HTIKDFWRMI WDHNAQLVVM IPDGQNMAED EFVYWPNKDE PINCESFKVT
2160 2170 2180 2190 2200
LMAEEHKCLS NEEKLIIQDF ILEATQDDYV LEVRHFQCPK WPNPDSPISK
2210 2220 2230 2240 2250
TFELISVIKE EAANRDGPMI VHDEHGGVTA GTFCALTTLM HQLEKENSVD
2260 2270 2280 2290 2300
VYQVAKMINL MRPGVFADIE QYQFLYKVIL SLVSTRQEEN PSTSLDSNGA
2310
ALPDGNIAES LESLV
Length:2,315
Mass (Da):254,587
Last modified:March 24, 2009 - v4
Checksum:iED9DD98D4CCA2883
GO
Isoform 2 (identifier: P23471-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1723-1729: Missing.

Show »
Length:2,308
Mass (Da):253,677
Checksum:iB18D669E478E9239
GO
Isoform 3 (identifier: P23471-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     755-1614: Missing.
     1723-1729: Missing.

Show »
Length:1,448
Mass (Da):162,663
Checksum:i07434438564290C4
GO

Sequence cautioni

The sequence AAC39934 differs from that shown. Contaminating sequence. The N-terminus may be contaminated with vector sequence.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti310V → A in AAC39934 (PubMed:9653645).Curated1
Sequence conflicti312S → R in AAC39934 (PubMed:9653645).Curated1
Sequence conflicti1426Missing in AAA60225 (PubMed:1323835).Curated1
Sequence conflicti1426Missing (PubMed:8387522).Curated1
Sequence conflicti1426Missing in EAL24344 (PubMed:12690205).Curated1
Sequence conflicti1426Missing in EAW83561 (Ref. 5) Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_0389423I → S. Corresponds to variant dbSNP:rs740965Ensembl.1
Natural variantiVAR_0389436R → L. Corresponds to variant dbSNP:rs11980387Ensembl.1
Natural variantiVAR_0389441433G → D3 PublicationsCorresponds to variant dbSNP:rs1147504Ensembl.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_054061755 – 1614Missing in isoform 3. 1 PublicationAdd BLAST860
Alternative sequenceiVSP_0540621723 – 1729Missing in isoform 2 and isoform 3. 1 Publication7

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M93426 mRNA Translation: AAA60225.1
AC006020 Genomic DNA Translation: AAF03527.1
AC006353 Genomic DNA No translation available.
AC073095 Genomic DNA No translation available.
CH236947 Genomic DNA Translation: EAL24344.1
CH471070 Genomic DNA Translation: EAW83561.1
U88967 mRNA Translation: AAC39934.1 Sequence problems.
X54135 mRNA Translation: CAA38070.1
CCDSiCCDS34740.1 [P23471-1]
CCDS56505.1 [P23471-3]
PIRiA46151
RefSeqiNP_001193767.1, NM_001206838.1
NP_001193768.1, NM_001206839.1 [P23471-3]
NP_002842.2, NM_002851.2 [P23471-1]
XP_005250576.1, XM_005250519.1 [P23471-2]
UniGeneiHs.489824

Genome annotation databases

EnsembliENST00000393386; ENSP00000377047; ENSG00000106278 [P23471-1]
ENST00000449182; ENSP00000410000; ENSG00000106278 [P23471-3]
GeneIDi5803
KEGGihsa:5803
UCSCiuc003vjy.4 human [P23471-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M93426 mRNA Translation: AAA60225.1
AC006020 Genomic DNA Translation: AAF03527.1
AC006353 Genomic DNA No translation available.
AC073095 Genomic DNA No translation available.
CH236947 Genomic DNA Translation: EAL24344.1
CH471070 Genomic DNA Translation: EAW83561.1
U88967 mRNA Translation: AAC39934.1 Sequence problems.
X54135 mRNA Translation: CAA38070.1
CCDSiCCDS34740.1 [P23471-1]
CCDS56505.1 [P23471-3]
PIRiA46151
RefSeqiNP_001193767.1, NM_001206838.1
NP_001193768.1, NM_001206839.1 [P23471-3]
NP_002842.2, NM_002851.2 [P23471-1]
XP_005250576.1, XM_005250519.1 [P23471-2]
UniGeneiHs.489824

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3JXFX-ray2.00A/B34-302[»]
3S97X-ray2.30A/B34-302[»]
5AWXX-ray1.86A1698-2000[»]
5H08X-ray2.53A1698-2000[»]
ProteinModelPortaliP23471
SMRiP23471
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi111767, 11 interactors
DIPiDIP-42063N
IntActiP23471, 11 interactors
MINTiP23471
STRINGi9606.ENSP00000377047

PTM databases

DEPODiP23471
iPTMnetiP23471
PhosphoSitePlusiP23471

Polymorphism and mutation databases

BioMutaiPTPRZ1
DMDMi229485537

Proteomic databases

EPDiP23471
PaxDbiP23471
PeptideAtlasiP23471
PRIDEiP23471
ProteomicsDBi54112
54113 [P23471-2]

Protocols and materials databases

DNASUi5803
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000393386; ENSP00000377047; ENSG00000106278 [P23471-1]
ENST00000449182; ENSP00000410000; ENSG00000106278 [P23471-3]
GeneIDi5803
KEGGihsa:5803
UCSCiuc003vjy.4 human [P23471-1]

Organism-specific databases

CTDi5803
DisGeNETi5803
EuPathDBiHostDB:ENSG00000106278.11
GeneCardsiPTPRZ1
HGNCiHGNC:9685 PTPRZ1
HPAiCAB025106
HPA015103
HPA071024
MalaCardsiPTPRZ1
MIMi176891 gene
604008 gene
neXtProtiNX_P23471
OpenTargetsiENSG00000106278
PharmGKBiPA34029
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG4228 Eukaryota
COG3338 LUCA
COG5599 LUCA
GeneTreeiENSGT00760000118900
HOGENOMiHOG000090262
HOVERGENiHBG053760
InParanoidiP23471
KOiK08114
OMAiMMHARSS
OrthoDBiEOG091G018S
PhylomeDBiP23471
TreeFamiTF351978

Enzyme and pathway databases

BRENDAi3.1.3.48 2681
ReactomeiR-HSA-449836 Other interleukin signaling
SignaLinkiP23471
SIGNORiP23471

Miscellaneous databases

ChiTaRSiPTPRZ1 human
EvolutionaryTraceiP23471
GeneWikiiPTPRZ1
GenomeRNAii5803
PROiPR:P23471
SOURCEiSearch...

Gene expression databases

BgeeiENSG00000106278 Expressed in 176 organ(s), highest expression level in substantia nigra
CleanExiHS_PTPRZ1
GenevisibleiP23471 HS

Family and domain databases

CDDicd00063 FN3, 1 hit
Gene3Di2.60.40.10, 1 hit
3.10.200.10, 1 hit
3.90.190.10, 2 hits
InterProiView protein in InterPro
IPR001148 CA_dom
IPR036398 CA_dom_sf
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR013783 Ig-like_fold
IPR029021 Prot-tyrosine_phosphatase-like
IPR000242 PTPase_domain
IPR016130 Tyr_Pase_AS
IPR003595 Tyr_Pase_cat
IPR000387 TYR_PHOSPHATASE_dom
PfamiView protein in Pfam
PF00194 Carb_anhydrase, 1 hit
PF00041 fn3, 1 hit
PF00102 Y_phosphatase, 2 hits
PRINTSiPR00700 PRTYPHPHTASE
SMARTiView protein in SMART
SM01057 Carb_anhydrase, 1 hit
SM00060 FN3, 1 hit
SM00194 PTPc, 2 hits
SM00404 PTPc_motif, 2 hits
SUPFAMiSSF49265 SSF49265, 1 hit
SSF51069 SSF51069, 1 hit
SSF52799 SSF52799, 2 hits
PROSITEiView protein in PROSITE
PS51144 ALPHA_CA_2, 1 hit
PS50853 FN3, 1 hit
PS00383 TYR_PHOSPHATASE_1, 1 hit
PS50056 TYR_PHOSPHATASE_2, 2 hits
PS50055 TYR_PHOSPHATASE_PTP, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiPTPRZ_HUMAN
AccessioniPrimary (citable) accession number: P23471
Secondary accession number(s): A4D0W5
, C9JFM0, O76043, Q9UDR6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1991
Last sequence update: March 24, 2009
Last modified: October 10, 2018
This is version 200 of the entry and version 4 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Human chromosome 7
    Human chromosome 7: entries, gene names and cross-references to MIM
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families
  4. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  5. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
  6. MIM cross-references
    Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot
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