Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

50S ribosomal protein L39e

Gene

rpl39e

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA. Forms part of the polypeptide exit tunnel.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L39e
Alternative name(s):
Hl39e
Hl46e
Gene namesi
Name:rpl39e
Ordered Locus Names:rrnAC3112
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHaloarculaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001270472 – 5050S ribosomal protein L39eAdd BLAST49

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Interacts weakly with protein L23.2 Publications

Protein-protein interaction databases

STRINGi272569.rrnAC3112

Structurei

Secondary structure

150
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi6 – 18Combined sources13
Helixi24 – 29Combined sources6
Turni30 – 32Combined sources3
Turni43 – 45Combined sources3

3D structure databases

ProteinModelPortaliP22452
SMRiP22452
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP22452

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiarCOG04177 Archaea
COG2167 LUCA
HOGENOMiHOG000230627
KOiK02924
OMAiMTHPKRR
OrthoDBiPOG093Z0N59

Family and domain databases

Gene3Di1.10.1620.10, 1 hit
HAMAPiMF_00629 Ribosomal_L39e, 1 hit
InterProiView protein in InterPro
IPR000077 Ribosomal_L39
IPR020083 Ribosomal_L39_CS
IPR023626 Ribosomal_L39e_dom_sf
PfamiView protein in Pfam
PF00832 Ribosomal_L39, 1 hit
SUPFAMiSSF48662 SSF48662, 1 hit
PROSITEiView protein in PROSITE
PS00051 RIBOSOMAL_L39E, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P22452-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKKSKATKK RLAKLDNQNS RVPAWVMLKT DREVQRNHKR RHWRRNDTDE
Length:50
Mass (Da):6,115
Last modified:January 23, 2007 - v2
Checksum:i4999D410AB7B331A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X55007 Genomic DNA Translation: CAA38750.1
AY596297 Genomic DNA Translation: AAV47823.1
PIRiS13066 R6HS39
RefSeqiWP_004518346.1, NC_006396.1

Genome annotation databases

EnsemblBacteriaiAAV47823; AAV47823; rrnAC3112
GeneIDi35218992
KEGGihma:rrnAC3112
PATRICifig|272569.17.peg.3654

Similar proteinsi

Entry informationi

Entry nameiRL39_HALMA
AccessioniPrimary (citable) accession number: P22452
Secondary accession number(s): Q5UY30
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 1, 1991
Last sequence update: January 23, 2007
Last modified: February 28, 2018
This is version 124 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health