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UniProtKB - P22141 (PSB4_YEAST)

Protein

Proteasome subunit beta type-4

Gene

PRE1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

The proteasome degrades poly-ubiquitinated proteins in the cytoplasm and in the nucleus. It is essential for the regulated turnover of proteins and for the removal of misfolded proteins. The proteasome is a multicatalytic proteinase complex that is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. It has an ATP-dependent proteolytic activity. This subunit has a chymotrypsin-like activity.

Miscellaneous

Present with 21800 molecules/cell in log phase SD medium.1 Publication

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

  • Cleavage of peptide bonds with very broad specificity. EC:3.4.25.1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • endopeptidase activator activity Source: SGD
  • endopeptidase activity Source: GO_Central
  • threonine-type endopeptidase activity Source: UniProtKB-KW
View the complete GO annotation on QuickGO ...

GO - Biological processi

View the complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionHydrolase, Protease, Threonine protease

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...BioCyci		YEAST:G3O-30199-MONOMER

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-SCE-1236978 Cross-presentation of soluble exogenous antigens (endosomes)
R-SCE-174113 SCF-beta-TrCP mediated degradation of Emi1
R-SCE-187577 SCF(Skp2)-mediated degradation of p27/p21
R-SCE-382556 ABC-family proteins mediated transport
R-SCE-450408 AUF1 (hnRNP D0) binds and destabilizes mRNA
R-SCE-5668541 TNFR2 non-canonical NF-kB pathway
R-SCE-5687128 MAPK6/MAPK4 signaling
R-SCE-5689880 Ub-specific processing proteases
R-SCE-68949 Orc1 removal from chromatin
R-SCE-69017 CDK-mediated phosphorylation and removal of Cdc6
R-SCE-69601 Ubiquitin Mediated Degradation of Phosphorylated Cdc25A
R-SCE-8854050 FBXL7 down-regulates AURKA during mitotic entry and in early mitosis
R-SCE-983168 Antigen processing: Ubiquitination & Proteasome degradation

Protein family/group databases

MEROPS protease database

More...MEROPSi		T01.984

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Proteasome subunit beta type-4 (EC:3.4.25.1)
Alternative name(s):
Macropain subunit C11
Multicatalytic endopeptidase complex subunit C11
Proteasome component C11
Proteinase YSCE subunit 11
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:PRE1
Ordered Locus Names:YER012W
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri559292 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002311 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome V

Organism-specific databases

Saccharomyces Genome Database

More...SGDi		S000000814 PRE1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Nucleus, Proteasome

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Chemistry databases

ChEMBL database of bioactive drug-like small molecules

More...ChEMBLi		CHEMBL4206

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001480551 – 198Proteasome subunit beta type-4Add BLAST198

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei1N-acetylmethionineCombined sources1
Modified residuei76PhosphoserineCombined sources1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

MaxQB - The MaxQuant DataBase

More...MaxQBi		P22141

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		P22141

PRoteomics IDEntifications database

More...PRIDEi		P22141

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		P22141

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

The 26S proteasome consists of a 20S proteasome core and two 19S regulatory subunits. The 20S proteasome core is composed of 28 subunits that are arranged in four stacked rings, resulting in a barrel-shaped structure. The two end rings are each formed by seven alpha subunits, and the two central rings are each formed by seven beta subunits. The catalytic chamber with the active sites is on the inside of the barrel.1 Publication

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...BioGridi		36744, 299 interactors

ComplexPortal: manually curated resource of macromolecular complexes

More...ComplexPortali		CPX-2262 26S Proteasome complex

Database of interacting proteins

More...DIPi		DIP-2808N

Protein interaction database and analysis system

More...IntActi		P22141, 42 interactors

Molecular INTeraction database

More...MINTi		P22141

STRING: functional protein association networks

More...STRINGi		4932.YER012W

Chemistry databases

BindingDB database of measured binding affinities

More...BindingDBi		P22141

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

1198
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...ProteinModelPortali		P22141

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		P22141

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

More...EvolutionaryTracei		P22141

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the peptidase T1B family.PROSITE-ProRule annotation

Phylogenomic databases

Ensembl GeneTree

More...GeneTreei		ENSGT00640000091536

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000188743

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		P22141

KEGG Orthology (KO)

More...KOi		K02734

Identification of Orthologs from Complete Genome Data

More...OMAi		KPYQVNV

Database of Orthologous Groups

More...OrthoDBi		EOG092C3ZSC

Family and domain databases

Conserved Domains Database

More...CDDi		cd03758 proteasome_beta_type_2, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		3.60.20.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR029055 Ntn_hydrolases_N
IPR035206 Proteasome_beta2
IPR016050 Proteasome_bsu_CS
IPR001353 Proteasome_sua/b
IPR023333 Proteasome_suB-type

The PANTHER Classification System

More...PANTHERi		PTHR11599:SF6 PTHR11599:SF6, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00227 Proteasome, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF56235 SSF56235, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS00854 PROTEASOME_BETA_1, 1 hit
PS51476 PROTEASOME_BETA_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

P22141-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDIILGIRVQ DSVILASSKA VTRGISVLKD SDDKTRQLSP HTLMSFAGEA 
        60         70         80         90        100
GDTVQFAEYI QANIQLYSIR EDYELSPQAV SSFVRQELAK SIRSRRPYQV 
       110        120        130        140        150
NVLIGGYDKK KNKPELYQID YLGTKVELPY GAHGYSGFYT FSLLDHHYRP 
       160        170        180        190 
DMTTEEGLDL LKLCVQELEK RMPMDFKGVI VKIVDKDGIR QVDDFQAQ
Length:198
Mass (Da):22,517
Last modified:February 1, 1995 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iED43D319A5895B40
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti183I → T (PubMed:2001673).Curated1
Sequence conflicti188G → R (PubMed:2001673).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
X56812 Genomic DNA Translation: CAA40149.1
U18778 Genomic DNA Translation: AAB64545.1
AY557807 Genomic DNA Translation: AAS56133.1
BK006939 Genomic DNA Translation: DAA07663.1

Protein sequence database of the Protein Information Resource

More...PIRi		S50470

NCBI Reference Sequences

More...RefSeqi		NP_010928.1, NM_001178903.1

Genome annotation databases

Ensembl fungal genome annotation project

More...EnsemblFungii		YER012W_mRNA; YER012W_mRNA; YER012W

Database of genes from NCBI RefSeq genomes

More...GeneIDi		856731

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		sce:YER012W

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X56812 Genomic DNA Translation: CAA40149.1
U18778 Genomic DNA Translation: AAB64545.1
AY557807 Genomic DNA Translation: AAS56133.1
BK006939 Genomic DNA Translation: DAA07663.1
PIRiS50470
RefSeqiNP_010928.1, NM_001178903.1

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...PDBei

Protein Data Bank RCSB

More...RCSB PDBi

Protein Data Bank Japan

More...PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1FNTX-ray3.20K/Y1-198[»]
1G0UX-ray2.40J/X1-198[»]
1G65X-ray2.25J/X1-198[»]
1JD2X-ray3.00J/Q1-198[»]
1RYPX-ray1.90K/Y1-198[»]
1Z7QX-ray3.22K/Y1-198[»]
2F16X-ray2.80J/X1-198[»]
2FAKX-ray2.80J/X1-198[»]
2GPLX-ray2.81J/X1-198[»]
2ZCYX-ray2.90J/X1-198[»]
3BDMX-ray2.70J/X1-198[»]
3D29X-ray2.60J/X1-198[»]
3DY3X-ray2.81J/X1-198[»]
3DY4X-ray2.80J/X1-198[»]
3E47X-ray3.00J/X1-198[»]
3GPJX-ray2.70J/X1-198[»]
3GPTX-ray2.41J/X1-198[»]
3GPWX-ray2.50J/X1-198[»]
3HYEX-ray2.50J/X1-198[»]
3JCOelectron microscopy4.806/k1-198[»]
3JCPelectron microscopy4.606/k1-198[»]
3MG0X-ray2.68J/X1-198[»]
3MG4X-ray3.11J/X1-198[»]
3MG6X-ray2.60J/X1-198[»]
3MG7X-ray2.78J/X1-198[»]
3MG8X-ray2.59J/X1-198[»]
3NZJX-ray2.40J/X1-198[»]
3NZWX-ray2.50J/X1-198[»]
3NZXX-ray2.70J/X1-198[»]
3OEUX-ray2.60J/X1-198[»]
3OEVX-ray2.85J/X1-198[»]
3OKJX-ray2.70J/X1-198[»]
3SDIX-ray2.65J/X1-198[»]
3SDKX-ray2.70J/X1-198[»]
3SHJX-ray2.80J/X1-198[»]
3TDDX-ray2.70J/X1-198[»]
3UN4X-ray3.40J/X1-198[»]
3UN8X-ray2.70J/X1-198[»]
3WXRX-ray3.15K/Y1-198[»]
4CR2electron microscopy7.7041-198[»]
4CR3electron microscopy9.3041-198[»]
4CR4electron microscopy8.8041-198[»]
4EU2X-ray2.51K/Y1-198[»]
4FZCX-ray2.80J/X1-198[»]
4FZGX-ray3.00J/X1-198[»]
4G4SX-ray2.49K1-198[»]
4GK7X-ray2.80J/X1-198[»]
4HNPX-ray2.80J/X1-198[»]
4HRCX-ray2.80J/X1-198[»]
4HRDX-ray2.80J/X1-198[»]
4INRX-ray2.70J/X1-198[»]
4INTX-ray2.90J/X1-198[»]
4INUX-ray3.10J/X1-198[»]
4J70X-ray2.80J/X1-198[»]
4JSQX-ray2.80J/X1-198[»]
4JSUX-ray2.90J/X1-198[»]
4JT0X-ray3.10J/X1-198[»]
4LQIX-ray2.70J/X1-198[»]
4LTCX-ray2.50J/X1-198[»]
4NNNX-ray2.50J/X1-198[»]
4NNWX-ray2.60J/X1-198[»]
4NO1X-ray2.50J/X1-198[»]
4NO6X-ray3.00J/X1-198[»]
4NO8X-ray2.70J/X1-198[»]
4NO9X-ray2.90J/X1-198[»]
4Q1SX-ray2.60J/X1-198[»]
4QBYX-ray3.00J/X1-198[»]
4QLQX-ray2.40J/X1-198[»]
4QLSX-ray2.80J/X1-198[»]
4QLTX-ray2.80J/X1-198[»]
4QLUX-ray2.80J/X1-198[»]
4QLVX-ray2.90J/X1-198[»]
4QUXX-ray3.00J/X1-198[»]
4QUYX-ray2.80J/X1-198[»]
4QV0X-ray3.10J/X1-198[»]
4QV1X-ray2.50J/X1-198[»]
4QV3X-ray3.00J/X1-198[»]
4QV4X-ray2.70J/X1-198[»]
4QV5X-ray2.70J/X1-198[»]
4QV6X-ray2.80J/X1-198[»]
4QV7X-ray2.60J/X1-198[»]
4QV8X-ray2.90J/X1-198[»]
4QV9X-ray2.60J/X1-198[»]
4QVLX-ray2.80J/X1-198[»]
4QVMX-ray2.80J/X1-198[»]
4QVNX-ray2.90J/X1-198[»]
4QVPX-ray2.30J/X1-198[»]
4QVQX-ray2.60J/X1-198[»]
4QVVX-ray2.80J/X1-198[»]
4QVWX-ray3.00J/X1-198[»]
4QVYX-ray2.51J/X1-198[»]
4QW0X-ray2.90J/X1-198[»]
4QW1X-ray2.90J/X1-198[»]
4QW3X-ray2.90J/X1-198[»]
4QW4X-ray2.80J/X1-198[»]
4QW5X-ray3.00J/X1-198[»]
4QW6X-ray2.90J/X1-198[»]
4QW7X-ray2.70J/X1-198[»]
4QWFX-ray3.00J/X1-198[»]
4QWGX-ray2.60J/X1-198[»]
4QWIX-ray2.60J/X1-198[»]
4QWJX-ray2.90J/X1-198[»]
4QWKX-ray2.80J/X1-198[»]
4QWLX-ray2.60J/X1-198[»]
4QWRX-ray2.90J/X1-198[»]
4QWSX-ray3.00J/X1-198[»]
4QWUX-ray3.00J/X1-198[»]
4QWXX-ray2.90J/X1-198[»]
4QXJX-ray2.80J/X1-198[»]
4QZ0X-ray3.00J/X1-198[»]
4QZ1X-ray3.00J/X1-198[»]
4QZ2X-ray2.70J/X1-198[»]
4QZ3X-ray2.80J/X1-198[»]
4QZ4X-ray3.00J/X1-198[»]
4QZ5X-ray2.80J/X1-198[»]
4QZ6X-ray2.90J/X1-198[»]
4QZ7X-ray2.80J/X1-198[»]
4QZWX-ray3.00J/X1-198[»]
4QZXX-ray2.60J/X1-198[»]
4QZZX-ray2.90J/X1-198[»]
4R00X-ray2.80J/X1-198[»]
4R02X-ray2.50J/X1-198[»]
4R17X-ray2.10J/X1-198[»]
4R18X-ray2.40J/X1-198[»]
4RURX-ray2.50J/X1-198[»]
4V7OX-ray3.00A1/AO/BK/BY1-198[»]
4X6ZX-ray2.70K/Y1-198[»]
4Y69X-ray2.90J/X1-198[»]
4Y6AX-ray2.60J/X1-198[»]
4Y6VX-ray2.80J/X1-198[»]
4Y6ZX-ray2.70J/X1-198[»]
4Y70X-ray2.40J/X1-198[»]
4Y74X-ray2.70J/X1-198[»]
4Y75X-ray2.80J/X1-198[»]
4Y77X-ray2.50J/X1-198[»]
4Y78X-ray2.80J/X1-198[»]
4Y7WX-ray2.50J/X1-198[»]
4Y7XX-ray2.60J/X1-198[»]
4Y7YX-ray2.40J/X1-198[»]
4Y80X-ray2.50J/X1-198[»]
4Y81X-ray2.80J/X1-198[»]
4Y82X-ray2.80J/X1-198[»]
4Y84X-ray2.70J/X1-198[»]
4Y8GX-ray2.60J/X1-198[»]
4Y8HX-ray2.50J/X1-198[»]
4Y8IX-ray2.60J/X1-198[»]
4Y8JX-ray2.70J/X1-198[»]
4Y8KX-ray2.60J/X1-198[»]
4Y8LX-ray2.40J/X1-198[»]
4Y8MX-ray2.80J/X1-198[»]
4Y8NX-ray2.60J/X1-198[»]
4Y8OX-ray2.70J/X1-198[»]
4Y8PX-ray2.80J/X1-198[»]
4Y8QX-ray2.60J/X1-198[»]
4Y8RX-ray2.70J/X1-198[»]
4Y8SX-ray2.70J/X1-198[»]
4Y8TX-ray2.70J/X1-198[»]
4Y8UX-ray2.90J/X1-198[»]
4Y9YX-ray2.80J/X1-198[»]
4Y9ZX-ray2.80J/X1-198[»]
4YA0X-ray2.80J/X1-198[»]
4YA1X-ray2.90J/X1-198[»]
4YA2X-ray2.70J/X1-198[»]
4YA3X-ray2.70J/X1-198[»]
4YA4X-ray2.90J/X1-198[»]
4YA5X-ray2.50J/X1-198[»]
4YA7X-ray2.70J/X1-198[»]
4YA9X-ray2.70J/X1-198[»]
4Z1LX-ray3.00J/X1-198[»]
5A5Belectron microscopy9.5041-198[»]
5AHJX-ray2.80J/X1-198[»]
5BOUX-ray2.60J/X1-198[»]
5BXLX-ray2.80J/X1-198[»]
5BXNX-ray2.80J/X1-198[»]
5CGFX-ray2.80J/X1-198[»]
5CGGX-ray2.90J/X1-198[»]
5CGHX-ray2.50J/X1-198[»]
5CGIX-ray2.80J/X1-198[»]
5CZ4X-ray2.30J/X1-198[»]
5CZ5X-ray2.80J/X1-198[»]
5CZ6X-ray2.70J/X1-198[»]
5CZ7X-ray2.50J/X1-198[»]
5CZ8X-ray2.80J/X1-198[»]
5CZ9X-ray2.90J/X1-198[»]
5CZAX-ray2.50J/X1-198[»]
5D0SX-ray2.50J/X1-198[»]
5D0TX-ray2.60J/X1-198[»]
5D0VX-ray2.90J/X1-198[»]
5D0WX-ray2.80J/X1-198[»]
5D0XX-ray2.60J/X1-198[»]
5D0ZX-ray2.90J/X1-198[»]
5DKIX-ray2.80J/X1-198[»]
5DKJX-ray2.80J/X1-198[»]
5FG7X-ray2.70J/X1-198[»]
5FG9X-ray2.60J/X1-198[»]
5FGAX-ray2.70J/X1-198[»]
5FGDX-ray2.80J/X1-198[»]
5FGEX-ray2.60J/X1-198[»]
5FGFX-ray2.60J/X1-198[»]
5FGGX-ray2.70J/X1-198[»]
5FGHX-ray2.80J/X1-198[»]
5FGIX-ray2.90J/X1-198[»]
5FHSX-ray2.70J/X1-198[»]
5JHRX-ray2.90J/X1-198[»]
5JHSX-ray3.00J/X1-198[»]
5L52X-ray2.70J/X1-198[»]
5L54X-ray2.80J/X1-198[»]
5L55X-ray2.90J/X1-198[»]
5L5AX-ray2.40J/X1-198[»]
5L5BX-ray2.80J/X1-198[»]
5L5DX-ray2.80J/X1-198[»]
5L5EX-ray2.90J/X1-198[»]
5L5FX-ray2.50J/X1-198[»]
5L5HX-ray2.60J/X1-198[»]
5L5IX-ray2.90J/X1-198[»]
5L5JX-ray2.90J/X1-198[»]
5L5OX-ray2.60J/X1-198[»]
5L5PX-ray2.80J/X1-198[»]
5L5QX-ray2.80J/X1-198[»]
5L5RX-ray2.90J/X1-198[»]
5L5SX-ray2.60J/X1-198[»]
5L5TX-ray2.90J/X1-198[»]
5L5UX-ray2.60J/X1-198[»]
5L5VX-ray2.70J/X1-198[»]
5L5WX-ray2.80J/X1-198[»]
5L5XX-ray2.90J/X1-198[»]
5L5YX-ray2.70J/X1-198[»]
5L5ZX-ray2.70J/X1-198[»]
5L60X-ray2.70J/X1-198[»]
5L61X-ray2.80J/X1-198[»]
5L62X-ray2.80J/X1-198[»]
5L63X-ray2.70J/X1-198[»]
5L64X-ray2.70J/X1-198[»]
5L65X-ray2.90J/X1-198[»]
5L66X-ray2.80J/X1-198[»]
5L67X-ray2.60J/X1-198[»]
5L68X-ray2.80J/X1-198[»]
5L69X-ray2.70J/X1-198[»]
5L6AX-ray2.80J/X1-198[»]
5L6BX-ray2.60J/X1-198[»]
5L6CX-ray2.60J/X1-198[»]
5LAIX-ray2.50J/X1-198[»]
5LAJX-ray2.90J/X1-198[»]
5LTTX-ray2.70J/X1-198[»]
5M2BX-ray2.70J/X1-198[»]
5MP9electron microscopy4.104/k1-198[»]
5MPAelectron microscopy4.504/k1-198[»]
5MPBelectron microscopy7.804/k1-198[»]
5MPCelectron microscopy7.704/k1-198[»]
5NIFX-ray3.00K/Y1-198[»]
5WVIelectron microscopy6.304/g1-198[»]
5WVKelectron microscopy4.204/g1-198[»]
6EF3electron microscopy4.1741-198[»]
6FVTelectron microscopy4.104/k1-195[»]
6FVUelectron microscopy4.504/k1-195[»]
6FVVelectron microscopy5.404/k1-195[»]
6FVWelectron microscopy4.504/k1-195[»]
6FVXelectron microscopy4.904/k1-195[»]
6FVYelectron microscopy6.104/k1-195[»]
6G7FX-ray2.70J/X1-198[»]
6G8MX-ray2.70J/X1-198[»]
6G8NX-ray3.00J/X1-198[»]
6GOPX-ray2.90J/X1-198[»]
ProteinModelPortaliP22141
SMRiP22141
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi36744, 299 interactors
ComplexPortaliCPX-2262 26S Proteasome complex
DIPiDIP-2808N
IntActiP22141, 42 interactors
MINTiP22141
STRINGi4932.YER012W

Chemistry databases

BindingDBiP22141
ChEMBLiCHEMBL4206

Protein family/group databases

MEROPSiT01.984

PTM databases

iPTMnetiP22141

Proteomic databases

MaxQBiP22141
PaxDbiP22141
PRIDEiP22141

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYER012W_mRNA; YER012W_mRNA; YER012W
GeneIDi856731
KEGGisce:YER012W

Organism-specific databases

SGDiS000000814 PRE1

Phylogenomic databases

GeneTreeiENSGT00640000091536
HOGENOMiHOG000188743
InParanoidiP22141
KOiK02734
OMAiKPYQVNV
OrthoDBiEOG092C3ZSC

Enzyme and pathway databases

BioCyciYEAST:G3O-30199-MONOMER
ReactomeiR-SCE-1236978 Cross-presentation of soluble exogenous antigens (endosomes)
R-SCE-174113 SCF-beta-TrCP mediated degradation of Emi1
R-SCE-187577 SCF(Skp2)-mediated degradation of p27/p21
R-SCE-382556 ABC-family proteins mediated transport
R-SCE-450408 AUF1 (hnRNP D0) binds and destabilizes mRNA
R-SCE-5668541 TNFR2 non-canonical NF-kB pathway
R-SCE-5687128 MAPK6/MAPK4 signaling
R-SCE-5689880 Ub-specific processing proteases
R-SCE-68949 Orc1 removal from chromatin
R-SCE-69017 CDK-mediated phosphorylation and removal of Cdc6
R-SCE-69601 Ubiquitin Mediated Degradation of Phosphorylated Cdc25A
R-SCE-8854050 FBXL7 down-regulates AURKA during mitotic entry and in early mitosis
R-SCE-983168 Antigen processing: Ubiquitination & Proteasome degradation

Miscellaneous databases

EvolutionaryTraceiP22141

Protein Ontology

More...PROi		PR:P22141

Family and domain databases

CDDicd03758 proteasome_beta_type_2, 1 hit
Gene3Di3.60.20.10, 1 hit
InterProiView protein in InterPro
IPR029055 Ntn_hydrolases_N
IPR035206 Proteasome_beta2
IPR016050 Proteasome_bsu_CS
IPR001353 Proteasome_sua/b
IPR023333 Proteasome_suB-type
PANTHERiPTHR11599:SF6 PTHR11599:SF6, 1 hit
PfamiView protein in Pfam
PF00227 Proteasome, 1 hit
SUPFAMiSSF56235 SSF56235, 1 hit
PROSITEiView protein in PROSITE
PS00854 PROTEASOME_BETA_1, 1 hit
PS51476 PROTEASOME_BETA_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPSB4_YEAST
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P22141
Secondary accession number(s): D3DLQ9
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 1, 1991
Last sequence update: February 1, 1995
Last modified: December 5, 2018
This is version 201 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome V
    Yeast (Saccharomyces cerevisiae) chromosome V: entries and gene names
  3. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  4. SIMILARITY comments
    Index of protein domains and families
  5. Peptidase families
    Classification of peptidase families and list of entries
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