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Protein

Ig lambda-2 chain C region

Gene
N/A
Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Ig lambda-2 chain C region
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 11

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_0000153616‹1 – 104Ig lambda-2 chain C regionAdd BLAST›104

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi27 ↔ 85PROSITE-ProRule annotation
Disulfide bondi103Interchain (with heavy chain)PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bond

Proteomic databases

PRIDEiP20767

Expressioni

Gene expression databases

BgeeiENSRNOG00000050000 Expressed in 9 organ(s), highest expression level in spleen
GenevisibleiP20767 RN

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliP20767
SMRiP20767
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 99Ig-likeAdd BLAST94

Keywords - Domaini

Immunoglobulin C region, Immunoglobulin domain

Phylogenomic databases

GeneTreeiENSGT00730000110696
HOGENOMiHOG000171113
HOVERGENiHBG039526
OMAiPSDWKLS
OrthoDBiEOG091G0XV9
PhylomeDBiP20767

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003006 Ig/MHC_CS
IPR003597 Ig_C1-set
PfamiView protein in Pfam
PF07654 C1-set, 1 hit
SMARTiView protein in SMART
SM00407 IGc1, 1 hit
SUPFAMiSSF48726 SSF48726, 1 hit
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 1 hit
PS00290 IG_MHC, 1 hit

Sequencei

Sequence statusi: Complete.

P20767-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
QPKSTPTLTV FPPSTEELQG NKATLVCLIS DFYPSDVEVA WKANGAPISQ
60 70 80 90 100
GVDTANPTKQ GNKYIASSFL RLTAEQWRSR NSFTCQVTHE GNTVEKSLSP

AECV
Length:104
Mass (Da):11,318
Last modified:February 1, 1991 - v1
Checksum:iF087906DE43F7276
GO

Sequence cautioni

The sequence AAA41420 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei11

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M22521 Genomic DNA Translation: AAA41420.1 Different initiation.
PIRiB27390
UniGeneiRn.114048
Rn.129
Rn.170503
Rn.200541
Rn.200543
Rn.201233

Genome annotation databases

EnsembliENSRNOT00000057971; ENSRNOP00000054780; ENSRNOG00000050000

Similar proteinsi

Entry informationi

Entry nameiLAC2_RAT
AccessioniPrimary (citable) accession number: P20767
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1991
Last sequence update: February 1, 1991
Last modified: September 12, 2018
This is version 106 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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