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UniProtKB - P20676 (NUP1_YEAST)

Entry version 197 (23 Feb 2022)
Sequence version 1 (01 Feb 1991)
Previous versions | rss
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Protein

Nucleoporin NUP1

Gene

NUP1

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. Active directional transport is assured by both, a Phe-Gly (FG) repeat affinity gradient for these transport factors across the NPC and a transport cofactor concentration gradient across the nuclear envelope (GSP1 and GSP2 GTPases associated predominantly with GTP in the nucleus, with GDP in the cytoplasm). As one of the FG repeat nucleoporins NUP1 is involved in interactions with and guidance of nuclear transport receptors such as SRP1-KAP95 (importin alpha and beta) through the NPC. Like the closely related NUP2 it also plays an important role in disassembling and recycling SRP1-KAP95 to the cytoplasm after nuclear import. Upon entry of the heterotrimeric SRP1-KAP95-cargo complex in the nucleus, NUP1 binds through its C-terminus to KAP95, thus accelerating the release of KAP95 and, indirectly, of the nuclear localization signal (NLS)-containing cargo from the SRP1-KAP95-cargo complex.

10 Publications

Miscellaneous

Present with 468 molecules/cell in log phase SD medium.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • nuclear localization sequence binding Source: GO_Central
  • structural constituent of nuclear pore Source: SGD
Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processmRNA transport, Protein transport, Translocation, Transport

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-SCE-3232142, SUMOylation of ubiquitinylation proteins
R-SCE-4085377, SUMOylation of SUMOylation proteins
R-SCE-4551638, SUMOylation of chromatin organization proteins
R-SCE-4570464, SUMOylation of RNA binding proteins

Protein family/group databases

Transport Classification Database

More...TCDBi		1.I.1.1.1, the nuclear pore complex (npc) family

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Nucleoporin NUP1
Alternative name(s):
Nuclear pore protein NUP1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:NUP1
Ordered Locus Names:YOR098C
ORF Names:YOR3182C
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri559292 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002311 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome XV

Organism-specific databases

Saccharomyces Genome Database

More...SGDi		S000005624, NUP1

Eukaryotic Pathogen, Vector and Host Database Resources

More...VEuPathDBi		FungiDB:YOR098C

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Membrane, Nuclear pore complex, Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM / Processing</a> section indicates that the initiator methionine is cleaved from the mature protein.<p><a href='/help/init_met' target='_top'>More...</a></p>Initiator methionineiRemovedCombined sources
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002049022 – 1076Nucleoporin NUP1Add BLAST1075

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei2N-acetylserineCombined sources1
Modified residuei54PhosphoserineCombined sources1
Modified residuei161PhosphoserineCombined sources1
Modified residuei381PhosphothreonineCombined sources1
Modified residuei383PhosphoserineCombined sources1
Modified residuei637PhosphoserineCombined sources1

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

Phosphorylated by CDC28.1 Publication

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

MaxQB - The MaxQuant DataBase

More...MaxQBi		P20676

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		P20676

PRoteomics IDEntifications database

More...PRIDEi		P20676

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		P20676

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Component of the nuclear pore complex (NPC). NPC constitutes the exclusive means of nucleocytoplasmic transport. NPCs allow the passive diffusion of ions and small molecules and the active, nuclear transport receptor-mediated bidirectional transport of macromolecules such as proteins, RNAs, ribonucleoparticles (RNPs), and ribosomal subunits across the nuclear envelope. Due to its 8-fold rotational symmetry, all subunits are present with 8 copies or multiples thereof.

Interacts through its FG repeats with nuclear transport receptors. Binds to the nuclear basket of the NPC through NUP60.

Interacts with KAP122.

5 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection">Interaction</a>' section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...BioGRIDi		34496, 95 interactors

ComplexPortal: manually curated resource of macromolecular complexes

More...ComplexPortali		CPX-824, Nuclear pore complex

Database of interacting proteins

More...DIPi		DIP-81N

Protein interaction database and analysis system

More...IntActi		P20676, 47 interactors

Molecular INTeraction database

More...MINTi		P20676

STRING: functional protein association networks

More...STRINGi		4932.YOR098C

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		P20676, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

11076
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		P20676

Database of comparative protein structure models

More...ModBasei		Search...

Protein Data Bank in Europe - Knowledge Base

More...PDBe-KBi		Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

More...EvolutionaryTracei		P20676

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati336 – 338FXF 13
Repeati384 – 386FXF 23
Repeati406 – 409FXFG 14
Repeati422 – 425FXFG 24
Repeati448 – 451FXFG 34
Repeati484 – 487FXFG 44
Repeati510 – 513FXFG 54
Repeati525 – 528FXFG 64
Repeati543 – 546FXFG 74
Repeati571 – 574FXFG 84
Repeati591 – 593FXF 33
Repeati614 – 616FXF 43
Repeati636 – 638FXF 53
Repeati657 – 659FXF 63
Repeati671 – 674FXFG 94
Repeati689 – 691FXF 73
Repeati708 – 711FXFG 104
Repeati727 – 730FXFG 114
Repeati753 – 755FXF 83
Repeati800 – 803FXFG 124
Repeati819 – 821FXF 93
Repeati866 – 868FXF 103
Repeati885 – 888FXFG 134
Repeati929 – 931FXF 113
Repeati1008 – 1009FG 12
Repeati1027 – 1028FG 22
Repeati1038 – 1039FG 32

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 39DisorderedSequence analysisAdd BLAST39
Regioni143 – 183DisorderedSequence analysisAdd BLAST41
Regioni224 – 260DisorderedSequence analysisAdd BLAST37
Regioni403 – 518DisorderedSequence analysisAdd BLAST116
Regioni548 – 743DisorderedSequence analysisAdd BLAST196
Regioni940 – 979DisorderedSequence analysisAdd BLAST40
Regioni1025 – 1054DisorderedSequence analysisAdd BLAST30
Regioni1040 – 1076Interaction with KAP95Add BLAST37

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi143 – 176Polar residuesSequence analysisAdd BLAST34
Compositional biasi238 – 260Polar residuesSequence analysisAdd BLAST23
Compositional biasi403 – 426Polar residuesSequence analysisAdd BLAST24
Compositional biasi462 – 476Basic and acidic residuesSequence analysisAdd BLAST15
Compositional biasi487 – 504Basic and acidic residuesSequence analysisAdd BLAST18
Compositional biasi548 – 592Polar residuesSequence analysisAdd BLAST45
Compositional biasi630 – 671Polar residuesSequence analysisAdd BLAST42
Compositional biasi681 – 743Polar residuesSequence analysisAdd BLAST63

<p>This subsection of the 'Family and domains' section provides general information on the biological role of a domain. The term 'domain' is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

Contains FG repeats. FG repeats are interaction sites for karyopherins (importins, exportins) and form probably an affinity gradient, guiding the transport proteins unidirectionally with their cargo through the NPC. FG repeat regions are highly flexible and lack ordered secondary structure. The overall conservation of FG repeats regarding exact sequence, spacing, and repeat unit length is limited. FG repeat types and their physico-chemical environment change across the NPC from the nucleoplasmic to the cytoplasmic side: FXFG repeats are especially abundant in NUPs on the nucleoplasmic side (in a highly charged environment and enriched in Ser and Thr).

Keywords - Domaini

Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG4719, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_316464_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		P20676

Identification of Orthologs from Complete Genome Data

More...OMAi		YGTENTE

Family and domain databases

Database of protein disorder

More...DisProti		DP01075

Intrinsically Disordered proteins with Extensive Annotations and Literature

More...IDEALi		IID50271

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR026054, Nucleoporin

The PANTHER Classification System

More...PANTHERi		PTHR23193, PTHR23193, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

P20676-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSNTSSVMS SPRVEKRSFS STLKSFFTNP NKKRPSSKKV FSSNLSYANH 
        60         70         80         90        100
LEESDVEDTL HVNKRKRVSG TSQHSDSLTQ NNNNAPIIIY GTENTERPPL 
       110        120        130        140        150
LPILPIQRLR LLREKQRVRN MRELGLIQST EFPSITSSVI LGSQSKSDEG 
       160        170        180        190        200
GSYLCTSSTP SPIKNGSCTR QLAGKSGEDT NVGLPILKSL KNRSNRKRFH 
       210        220        230        240        250
SQSKGTVWSA NFEYDLSEYD AIQKKDNKDK EGNAGGDQKT SENRNNIKSS 
       260        270        280        290        300
ISNGNLATGP NLTSEIEDLR ADINSNRLSN PQKNLLLKGP ASTVAKTAPI 
       310        320        330        340        350
QESFVPNSER SGTPTLKKNI EPKKDKESIV LPTVGFDFIK DNETPSKKTS 
       360        370        380        390        400
PKATSSAGAV FKSSVEMGKT DKSTKTAEAP TLSFNFSQKA NKTKAVDNTV 
       410        420        430        440        450
PSTTLFNFGG KSDTVTSASQ PFKFGKTSEK SENHTESDAP PKSTAPIFSF 
       460        470        480        490        500
GKQEENGDEG DDENEPKRKR RLPVSEDTNT KPLFDFGKTG DQKETKKGES 
       510        520        530        540        550
EKDASGKPSF VFGASDKQAE GTPLFTFGKK ADVTSNIDSS AQFTFGKAAT 
       560        570        580        590        600
AKETHTKPSE TPATIVKKPT FTFGQSTSEN KISEGSAKPT FSFSKSEEER 
       610        620        630        640        650
KSSPISNEAA KPSFSFPGKP VDVQAPTDDK TLKPTFSFTE PAQKDSSVVS 
       660        670        680        690        700
EPKKPSFTFA SSKTSQPKPL FSFGKSDAAK EPPGSNTSFS FTKPPANETD 
       710        720        730        740        750
KRPTPPSFTF GGSTTNNTTT TSTKPSFSFG APESMKSTAS TAAANTEKLS 
       760        770        780        790        800
NGFSFTKFNH NKEKSNSPTS FFDGSASSTP IPVLGKPTDA TGNTTSKSAF 
       810        820        830        840        850
SFGTANTNGT NASANSTSFS FNAPATGNGT TTTSNTSGTN IAGTFNVGKP 
       860        870        880        890        900
DQSIASGNTN GAGSAFGFSS SGTAATGAAS NQSSFNFGNN GAGGLNPFTS 
       910        920        930        940        950
ATSSTNANAG LFNKPPSTNA QNVNVPSAFN FTGNNSTPGG GSVFNMNGNT 
       960        970        980        990       1000
NANTVFAGSN NQPHQSQTPS FNTNSSFTPS TVPNINFSGL NGGITNTATN 
      1010       1020       1030       1040       1050
ALRPSDIFGA NAASGSNSNV TNPSSIFGGA GGVPTTSFGQ PQSAPNQMGM 
      1060       1070 
GTNNGMSMGG GVMANRKIAR MRHSKR
Length:1,076
Mass (Da):113,581
Last modified:February 1, 1991 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i4AC23567D2FB53CC
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
M33632 Genomic DNA Translation: AAA34822.1
X94335 Genomic DNA Translation: CAA64020.1
Z75006 Genomic DNA Translation: CAA99295.1
BK006948 Genomic DNA Translation: DAA10875.1

Protein sequence database of the Protein Information Resource

More...PIRi		A35622

NCBI Reference Sequences

More...RefSeqi		NP_014741.1, NM_001183517.1

Genome annotation databases

Ensembl fungal genome annotation project

More...EnsemblFungii		YOR098C_mRNA; YOR098C; YOR098C

Database of genes from NCBI RefSeq genomes

More...GeneIDi		854265

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		sce:YOR098C

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M33632 Genomic DNA Translation: AAA34822.1
X94335 Genomic DNA Translation: CAA64020.1
Z75006 Genomic DNA Translation: CAA99295.1
BK006948 Genomic DNA Translation: DAA10875.1
PIRiA35622
RefSeqiNP_014741.1, NM_001183517.1

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...PDBei

Protein Data Bank RCSB

More...RCSB PDBi

Protein Data Bank Japan

More...PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4C31X-ray3.00C/F/X/Y322-355[»]
4MBEX-ray2.61G/H/X/Y316-340[»]
5OWUX-ray2.00B1-1076[»]
SMRiP20676
ModBaseiSearch...
PDBe-KBiSearch...

Protein-protein interaction databases

BioGRIDi34496, 95 interactors
ComplexPortaliCPX-824, Nuclear pore complex
DIPiDIP-81N
IntActiP20676, 47 interactors
MINTiP20676
STRINGi4932.YOR098C

Protein family/group databases

TCDBi1.I.1.1.1, the nuclear pore complex (npc) family

PTM databases

iPTMnetiP20676

Proteomic databases

MaxQBiP20676
PaxDbiP20676
PRIDEiP20676

Genome annotation databases

EnsemblFungiiYOR098C_mRNA; YOR098C; YOR098C
GeneIDi854265
KEGGisce:YOR098C

Organism-specific databases

SGDiS000005624, NUP1
VEuPathDBiFungiDB:YOR098C

Phylogenomic databases

eggNOGiKOG4719, Eukaryota
HOGENOMiCLU_316464_0_0_1
InParanoidiP20676
OMAiYGTENTE

Enzyme and pathway databases

ReactomeiR-SCE-3232142, SUMOylation of ubiquitinylation proteins
R-SCE-4085377, SUMOylation of SUMOylation proteins
R-SCE-4551638, SUMOylation of chromatin organization proteins
R-SCE-4570464, SUMOylation of RNA binding proteins

Miscellaneous databases

EvolutionaryTraceiP20676

Protein Ontology

More...PROi		PR:P20676
RNActiP20676, protein

Family and domain databases

DisProtiDP01075
IDEALiIID50271
InterProiView protein in InterPro
IPR026054, Nucleoporin
PANTHERiPTHR23193, PTHR23193, 2 hits

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiNUP1_YEAST
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P20676
Secondary accession number(s): D6W2F9
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1991
Last sequence update: February 1, 1991
Last modified: February 23, 2022
This is version 197 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome XV
    Yeast (Saccharomyces cerevisiae) chromosome XV: entries and gene names
  3. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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