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Protein

33 kDa ribonucleoprotein, chloroplastic

Gene
N/A
Organism
Nicotiana sylvestris (Wood tobacco) (South American tobacco)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Could be involved in splicing and/or processing of chloroplast RNA's.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, RNA-binding
Biological processmRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
33 kDa ribonucleoprotein, chloroplastic
OrganismiNicotiana sylvestris (Wood tobacco) (South American tobacco)
Taxonomic identifieri4096 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeNicotianoideaeNicotianeaeNicotiana
Proteomesi
  • UP000189701 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 71Chloroplast1 PublicationAdd BLAST71
ChainiPRO_000003103072 – 32433 kDa ribonucleoprotein, chloroplasticAdd BLAST253

Proteomic databases

PRIDEiP19684

Structurei

3D structure databases

ProteinModelPortaliP19684
SMRiP19684
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini114 – 192RRM 1PROSITE-ProRule annotationAdd BLAST79
Domaini217 – 296RRM 2PROSITE-ProRule annotationAdd BLAST80

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi72 – 113Asp/Glu-rich (acidic)Add BLAST42

Keywords - Domaini

Repeat, Transit peptide

Family and domain databases

Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P19684-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSGCCFSFAA TASTSSTSLL YLFTQKPKFS VDHLSLSTYN THFNFKINST
60 70 80 90 100
KLKAHFPISS LYRSSIFLST CASVSDGVEV VQEDDEEEVA LSAEEEEEIE
110 120 130 140 150
EKEERVESES VEGGRLYVGN LPFSMTSSQL SEIFAEAGTV ANVEIVYDRV
160 170 180 190 200
TDRSRGFAFV TMGSVEEAKE AIRLFDGSQV GGRTVKVNFP EVPRGGEREV
210 220 230 240 250
MSAKIRSTYQ GFVDSPHKLY VANLSWALTS QGLRDAFADQ PGFMSAKVIY
260 270 280 290 300
DRSSGRSRGF GFITFSSAEA MNSALDTMNE VELEGRPLRL NVAGQKAPVS
310 320
SPPVVETSPE NDSDNSELLS SLSS
Length:324
Mass (Da):35,381
Last modified:February 1, 1991 - v1
Checksum:i3C9B641DF60B20A0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X53932 mRNA Translation: CAA37879.1
UniGeneiNta.4185

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X53932 mRNA Translation: CAA37879.1
UniGeneiNta.4185

3D structure databases

ProteinModelPortaliP19684
SMRiP19684
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiP19684

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiROC5_NICSY
AccessioniPrimary (citable) accession number: P19684
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 1, 1991
Last sequence update: February 1, 1991
Last modified: May 23, 2018
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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