Rpl9

Functionⁱ

GO - Molecular functionⁱ

rRNA binding Source: InterPro
structural constituent of ribosome
Source: GO_Central
Inferred from biological aspect of ancestorⁱ
- 21873635

View the complete GO annotation on QuickGO ...

GO - Biological processⁱ

cellular response to nerve growth factor stimulus
Source: RGD
Inferred from expression patternⁱ
- 11922865
cytoplasmic translation
Source: GO_Central
Inferred from biological aspect of ancestorⁱ
- 21873635

View the complete GO annotation on QuickGO ...

Keywordsⁱ

Molecular function	Ribonucleoprotein, Ribosomal protein

Molecular function

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyⁱ

Protein namesⁱ	Recommended name: 60S ribosomal protein L9
Gene namesⁱ	Name:Rpl9
Organismⁱ	Rattus norvegicus (Rat)
Taxonomic identifierⁱ	10116 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus
Proteomesⁱ	UP000002494 Componentsⁱ: Chromosome 1, Chromosome 14, Chromosome 3

Organism-specific databases

Rat genome database More...RGDⁱ	62049 Rpl9

RGDⁱ

62049 Rpl9

Subcellular locationⁱ

GO - Cellular component

PTM / Processingⁱ

Molecule processing

Feature key	Position(s)	DescriptionActions	Graphical view	Length
ChainⁱPRO_0000131100	1 – 192	60S ribosomal protein L9Add BLAST		192

Amino acid modifications

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Modified residueⁱ	121	N6-acetyllysineBy similarity		1

Keywords - PTMⁱ

Acetylation

Proteomic databases

PaxDbⁱ	P17077
PRIDEⁱ	P17077

PTM databases

iPTMnetⁱ	P17077
PhosphoSitePlusⁱ	P17077

Expressionⁱ

Gene expression databases

Bgeeⁱ	ENSRNOG00000026716 Expressed in 9 organ(s), highest expression level in spleen
Genevisibleⁱ	P17077 RN

Interactionⁱ

Protein-protein interaction databases

BioGridⁱ	247930, 1 interactor
IntActⁱ	P17077, 3 interactors
STRINGⁱ	10116.ENSRNOP00000041817

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	P17077
SMRⁱ	P17077
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Sequence similaritiesⁱ

Belongs to the universal ribosomal protein uL6 family.Curated

Phylogenomic databases

eggNOGⁱ	KOG3255 Eukaryota COG0097 LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00390000015224
HOGENOMⁱ	HOG000039905
HOVERGENⁱ	HBG000942
InParanoidⁱ	P17077
KEGG Orthology (KO) More...KOⁱ	K02940
OMAⁱ	VFQDGIY
Database of Orthologous Groups More...OrthoDBⁱ	EOG091G0R6Z
PhylomeDBⁱ	P17077
TreeFamⁱ	TF300033

Family and domain databases

Gene3Dⁱ	3.90.930.12, 2 hits
InterProⁱ	View protein in InterPro IPR000702 Ribosomal_L6 IPR020040 Ribosomal_L6_a/b-dom IPR036789 Ribosomal_L6_a/b-dom_sf IPR002359 Ribosomal_L6_CS2
PANTHERⁱ	PTHR11655 PTHR11655, 1 hit
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF00347 Ribosomal_L6, 2 hits
PIRSFⁱ	PIRSF002162 Ribosomal_L6, 1 hit
SUPFAMⁱ	SSF56053 SSF56053, 2 hits
PROSITEⁱ	View protein in PROSITE PS00700 RIBOSOMAL_L6_2, 1 hit

Sequenceⁱ

Sequence statusⁱ: Complete.

P17077-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MKTILSNQTV DIPENVDITL KGRTVIVKGP RGTLRRDFNH INVELSLLGK 
        60         70         80         90        100
KKKRLRVDKW WGNRKELATV RTICSHVQNM IKGVTLGFRY KMRSVYAHFP 
       110        120        130        140        150
INVVIQENGS LVEIRNFLGE KYIRRVRMRT GVACSVSQAQ KDELILEGND 
       160        170        180        190 
IELVSNSAAL IQQATTVKNK DIRKFLDGIY VSEKGTVQQP DE

Length:192

Mass (Da):21,893

Last modified:August 1, 1990 - v1

Checksum:ⁱ024F3ABA12F77D30

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	X51706 mRNA Translation: CAA36002.1 BC086561 mRNA Translation: AAH86561.1
PIRⁱ	JH0222 R5RT9
NCBI Reference Sequences More...RefSeqⁱ	NP_001007599.3, NM_001007598.3 XP_002725578.1, XM_002725532.5 XP_002729193.1, XM_002729147.2 XP_003748822.1, XM_003748774.4 XP_003753735.1, XM_003753687.1
UniGeneⁱ	Rn.107914 Rn.201359

Genome annotation databases

Protein	Similar proteins		Species	Score	Length	Source
P17077	60S ribosomal protein L9 pseudogene		RAT		188	UniRef100_P17077

Protein	Similar proteins		Species	Score	Length	Source
P17077	60S ribosomal protein L9	)	HUMAN		192	UniRef90_P32969
60S ribosomal protein L9		PONAB		192
60S ribosomal protein L9		MOUSE		192
60S ribosomal protein L9		MACFA		192
60S ribosomal protein L9		BOVIN		192
+276

Protein	Similar proteins		Species	Score	Length	Source
P17077	60S ribosomal protein L9	)	HUMAN		192	UniRef50_P32969
60S ribosomal protein L9		BOVIN		192
60S ribosomal protein L9		MACFA		192
60S ribosomal protein L9		MOUSE		192
60S ribosomal protein L9		PONAB		192
+378

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	X51706 mRNA Translation: CAA36002.1 BC086561 mRNA Translation: AAH86561.1
PIRⁱ	JH0222 R5RT9
RefSeqⁱ	NP_001007599.3, NM_001007598.3 XP_002725578.1, XM_002725532.5 XP_002729193.1, XM_002729147.2 XP_003748822.1, XM_003748774.4 XP_003753735.1, XM_003753687.1
UniGeneⁱ	Rn.107914 Rn.201359

3D structure databases

ProteinModelPortalⁱ	P17077
SMRⁱ	P17077
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

BioGridⁱ	247930, 1 interactor
IntActⁱ	P17077, 3 interactors
STRINGⁱ	10116.ENSRNOP00000041817

PTM databases

iPTMnetⁱ	P17077
PhosphoSitePlusⁱ	P17077

Proteomic databases

PaxDbⁱ	P17077
PRIDEⁱ	P17077

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

Ensemblⁱ	ENSRNOT00000038927; ENSRNOP00000032635; ENSRNOG00000026716 ENSRNOT00000042201; ENSRNOP00000041817; ENSRNOG00000030476 ENSRNOT00000052231; ENSRNOP00000069650; ENSRNOG00000028449 ENSRNOT00000076245; ENSRNOP00000068363; ENSRNOG00000026716
GeneIDⁱ	100360449 100364457 29257
KEGGⁱ	rno:100360449 rno:100364457 rno:29257
UCSCⁱ	RGD:62049 rat

Organism-specific databases

CTDⁱ	6133
RGDⁱ	62049 Rpl9

Phylogenomic databases

eggNOGⁱ	KOG3255 Eukaryota COG0097 LUCA
GeneTreeⁱ	ENSGT00390000015224
HOGENOMⁱ	HOG000039905
HOVERGENⁱ	HBG000942
InParanoidⁱ	P17077
KOⁱ	K02940
OMAⁱ	VFQDGIY
OrthoDBⁱ	EOG091G0R6Z
PhylomeDBⁱ	P17077
TreeFamⁱ	TF300033

Miscellaneous databases

Protein Ontology More...PROⁱ	PR:P17077

PROⁱ

PR:P17077

Gene expression databases

Bgeeⁱ	ENSRNOG00000026716 Expressed in 9 organ(s), highest expression level in spleen
Genevisibleⁱ	P17077 RN

Family and domain databases

Gene3Dⁱ	3.90.930.12, 2 hits
InterProⁱ	View protein in InterPro IPR000702 Ribosomal_L6 IPR020040 Ribosomal_L6_a/b-dom IPR036789 Ribosomal_L6_a/b-dom_sf IPR002359 Ribosomal_L6_CS2
PANTHERⁱ	PTHR11655 PTHR11655, 1 hit
Pfamⁱ	View protein in Pfam PF00347 Ribosomal_L6, 2 hits
PIRSFⁱ	PIRSF002162 Ribosomal_L6, 1 hit
SUPFAMⁱ	SSF56053 SSF56053, 2 hits
PROSITEⁱ	View protein in PROSITE PS00700 RIBOSOMAL_L6_2, 1 hit
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	RL9_RAT
Accessionⁱ	P17077Primary (citable) accession number: P17077
Entry historyⁱ	Integrated into UniProtKB/Swiss-Prot:	August 1, 1990
	Last sequence update:	August 1, 1990
	Last modified:	November 7, 2018
	This is version 136 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Reviewed (UniProtKB/Swiss-Prot)
Annotation program	Chordata Protein Annotation Program

UniProtKB

UniParc

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UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - P17077 (RL9_RAT)

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60S ribosomal protein L9

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Cytosol

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Amino acid modifications

Keywords - PTMi

Proteomic databases

PTM databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Phylogenomic databases

Family and domain databases

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

PTM databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Miscellaneous databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

PTM / Processingⁱ

Keywords - PTMⁱ

Expressionⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequence similaritiesⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ