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Entry version 182 (08 May 2019)
Sequence version 5 (03 May 2011)
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Protein

Zinc finger protein 30

Gene

ZNF30

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

May be involved in transcriptional regulation.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Function’ section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri120 – 142C2H2-type 1; degeneratePROSITE-ProRule annotationAdd BLAST23
Zinc fingeri148 – 170C2H2-type 2PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri176 – 198C2H2-type 3; degeneratePROSITE-ProRule annotationAdd BLAST23
Zinc fingeri204 – 226C2H2-type 4PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri232 – 254C2H2-type 5PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri260 – 282C2H2-type 6PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri288 – 310C2H2-type 7PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri316 – 338C2H2-type 8PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri344 – 366C2H2-type 9PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri372 – 394C2H2-type 10PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri400 – 422C2H2-type 11PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri428 – 450C2H2-type 12PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri456 – 478C2H2-type 13PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri484 – 506C2H2-type 14PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri512 – 534C2H2-type 15PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri540 – 562C2H2-type 16PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri568 – 590C2H2-type 17PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri596 – 618C2H2-type 18PROSITE-ProRule annotationAdd BLAST23

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation
LigandMetal-binding, Zinc

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-HSA-212436 Generic Transcription Pathway

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Zinc finger protein 30
Alternative name(s):
Zinc finger protein KOX28
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:ZNF30
Synonyms:KOX28
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHomo sapiens (Human)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9606 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005640 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 19

Organism-specific databases

Human Gene Nomenclature Database

More...
HGNCi
HGNC:13090 ZNF30

neXtProt; the human protein knowledge platform

More...
neXtProti
NX_P17039

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Organism-specific databases

Open Targets

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OpenTargetsi
ENSG00000168661

The Pharmacogenetics and Pharmacogenomics Knowledge Base

More...
PharmGKBi
PA37665

Polymorphism and mutation databases

BioMuta curated single-nucleotide variation and disease association database

More...
BioMutai
ZNF30

Domain mapping of disease mutations (DMDM)

More...
DMDMi
332278252

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000473591 – 623Zinc finger protein 30Add BLAST623

Proteomic databases

jPOST - Japan Proteome Standard Repository/Database

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jPOSTi
P17039

MaxQB - The MaxQuant DataBase

More...
MaxQBi
P17039

PaxDb, a database of protein abundance averages across all three domains of life

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PaxDbi
P17039

PeptideAtlas

More...
PeptideAtlasi
P17039

PRoteomics IDEntifications database

More...
PRIDEi
P17039

ProteomicsDB human proteome resource

More...
ProteomicsDBi
53442
53443 [P17039-2]
53444 [P17039-3]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
P17039

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

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PhosphoSitePlusi
P17039

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

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Bgeei
ENSG00000168661 Expressed in 167 organ(s), highest expression level in amniotic fluid

ExpressionAtlas, Differential and Baseline Expression

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ExpressionAtlasi
P17039 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

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Genevisiblei
P17039 HS

Organism-specific databases

Human Protein Atlas

More...
HPAi
HPA030400

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

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BioGridi
124660, 2 interactors

Protein interaction database and analysis system

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IntActi
P17039, 1 interactor

STRING: functional protein association networks

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STRINGi
9606.ENSP00000403441

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

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SMRi
P17039

Database of comparative protein structure models

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ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini14 – 85KRABPROSITE-ProRule annotationAdd BLAST72

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri120 – 142C2H2-type 1; degeneratePROSITE-ProRule annotationAdd BLAST23
Zinc fingeri148 – 170C2H2-type 2PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri176 – 198C2H2-type 3; degeneratePROSITE-ProRule annotationAdd BLAST23
Zinc fingeri204 – 226C2H2-type 4PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri232 – 254C2H2-type 5PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri260 – 282C2H2-type 6PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri288 – 310C2H2-type 7PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri316 – 338C2H2-type 8PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri344 – 366C2H2-type 9PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri372 – 394C2H2-type 10PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri400 – 422C2H2-type 11PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri428 – 450C2H2-type 12PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri456 – 478C2H2-type 13PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri484 – 506C2H2-type 14PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri512 – 534C2H2-type 15PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri540 – 562C2H2-type 16PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri568 – 590C2H2-type 17PROSITE-ProRule annotationAdd BLAST23
Zinc fingeri596 – 618C2H2-type 18PROSITE-ProRule annotationAdd BLAST23

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

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eggNOGi
KOG1721 Eukaryota
COG5048 LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000164353

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000234617

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
P17039

KEGG Orthology (KO)

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KOi
K09228

Identification of Orthologs from Complete Genome Data

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OMAi
FVKHGRI

Database of Orthologous Groups

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OrthoDBi
1318335at2759

TreeFam database of animal gene trees

More...
TreeFami
TF341817

Family and domain databases

Conserved Domains Database

More...
CDDi
cd07765 KRAB_A-box, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001909 KRAB
IPR036051 KRAB_dom_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01352 KRAB, 1 hit
PF00096 zf-C2H2, 14 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00349 KRAB, 1 hit
SM00355 ZnF_C2H2, 17 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF109640 SSF109640, 1 hit
SSF57667 SSF57667, 10 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50805 KRAB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 16 hits
PS50157 ZINC_FINGER_C2H2_2, 18 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: P17039-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAHKYVGLQY HGSVTFEDVA IAFSQQEWES LDSSQRGLYR DVMLENYRNL
60 70 80 90 100
VSMGHSRSKP HVIALLEQWK EPEVTVRKDG RRWCTDLQLE DDTIGCKEMP
110 120 130 140 150
TSENCPSFAL HQKISRQKPR ECQEYGKTLC QDSKPVQHER IHSSEKPNRC
160 170 180 190 200
KECGKNFSNG HQLTIHQRLH VGEKPYKYEK CGKAFISGSA FVKHGRIHTG
210 220 230 240 250
EKPLKCKQCG KTISGSYQLT VHKSIHTGKK PYECGECGKA FLVYGKLTRH
260 270 280 290 300
QSTHTGEKPF GCEECGKAFS TFSYLVQHQR IHTSEKPYEC KECGKAFSTS
310 320 330 340 350
SPLAKHQRIH TGEKPYECKE CGKSFTVYGQ LTRHQSIHTG EKPFECKECG
360 370 380 390 400
KAFRLSSFLH AHQRIHAEIK PYGCKECGRT FSRASYLVQH GRLHTGEKPY
410 420 430 440 450
ECKECGKAFS TGSYLVQHQR IHTGEKPYEC KECGKAFISR HQLTVHQRVH
460 470 480 490 500
TGEKPYECKE CGKAFRVHVH LTQHRKIHTD VKPYECKECG KTFSRASYLV
510 520 530 540 550
QHSRIHTGKK PYECKECGKA FSSGSYLVQH QRIHTGEKPY ECNKCGKAFT
560 570 580 590 600
VYGQLIGHQS VHTGEKPFEC KECGKAFRLN SFLTEHQRVH TGEKPFKCKK
610 620
CGKTFRYSSA LKVHLRKHMS VIP
Length:623
Mass (Da):71,417
Last modified:May 3, 2011 - v5
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i50F63EFB2027C717
GO
Isoform 2 (identifier: P17039-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     53-53: M → MA

Show »
Length:624
Mass (Da):71,489
Checksum:i2B02E220567934F5
GO
Isoform 3 (identifier: P17039-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     86-86: D → G
     87-623: Missing.

Note: May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay.
Show »
Length:86
Mass (Da):10,040
Checksum:iD2FB1AA24ACFDC1D
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
V9GYJ2V9GYJ2_HUMAN
Zinc finger protein 30
ZNF30
86Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti14V → M in BAG58432 (PubMed:14702039).Curated1
Sequence conflicti24S → F in BAG58432 (PubMed:14702039).Curated1
Sequence conflicti193K → R in CAE45802 (PubMed:17974005).Curated1
Sequence conflicti238G → W in CAE45802 (PubMed:17974005).Curated1
Sequence conflicti304A → V in CAE45802 (PubMed:17974005).Curated1
Sequence conflicti492T → A in AAI42997 (PubMed:15489334).Curated1
Sequence conflicti493F → L in CAE45802 (PubMed:17974005).Curated1

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes natural variant(s) of the protein sequence.<p><a href='/help/variant' target='_top'>More...</a></p>Natural variantiVAR_047736123Q → R3 PublicationsCorresponds to variant dbSNP:rs1811Ensembl.1
Natural variantiVAR_047737190A → T. Corresponds to variant dbSNP:rs8100497Ensembl.1
Natural variantiVAR_047738379R → K2 PublicationsCorresponds to variant dbSNP:rs1345658Ensembl.1
Natural variantiVAR_047739400Y → C1 PublicationCorresponds to variant dbSNP:rs765746Ensembl.1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_04094253M → MA in isoform 2. 1 Publication1
Alternative sequenceiVSP_04094386D → G in isoform 3. 2 Publications1
Alternative sequenceiVSP_04094487 – 623Missing in isoform 3. 2 PublicationsAdd BLAST537

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AK295515 mRNA Translation: BAG58432.1
AK290435 mRNA Translation: BAF83124.1
BX640666 mRNA Translation: CAE45802.1
AC008555 Genomic DNA No translation available.
BC142996 mRNA Translation: AAI42997.1
X52359 mRNA Translation: CAA36585.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS46044.1 [P17039-2]
CCDS46045.1 [P17039-1]

Protein sequence database of the Protein Information Resource

More...
PIRi
I37968

NCBI Reference Sequences

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RefSeqi
NP_001092907.1, NM_001099437.1 [P17039-2]
NP_001092908.1, NM_001099438.1 [P17039-2]
NP_919306.2, NM_194325.2 [P17039-1]
XP_011525745.1, XM_011527443.2 [P17039-2]
XP_011525746.1, XM_011527444.1 [P17039-2]
XP_016882912.1, XM_017027423.1 [P17039-2]
XP_016882913.1, XM_017027424.1 [P17039-2]
XP_016882914.1, XM_017027425.1 [P17039-1]
XP_016882915.1, XM_017027426.1 [P17039-1]
XP_016882916.1, XM_017027427.1
XP_016882917.1, XM_017027428.1
XP_016882918.1, XM_017027429.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENST00000303586; ENSP00000303889; ENSG00000168661 [P17039-2]
ENST00000439785; ENSP00000403441; ENSG00000168661 [P17039-2]
ENST00000601142; ENSP00000469954; ENSG00000168661 [P17039-1]
ENST00000601957; ENSP00000470094; ENSG00000168661 [P17039-3]

Database of genes from NCBI RefSeq genomes

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GeneIDi
90075

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
hsa:90075

UCSC genome browser

More...
UCSCi
uc010edp.2 human [P17039-1]

Keywords - Coding sequence diversityi

Alternative splicing, Polymorphism

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK295515 mRNA Translation: BAG58432.1
AK290435 mRNA Translation: BAF83124.1
BX640666 mRNA Translation: CAE45802.1
AC008555 Genomic DNA No translation available.
BC142996 mRNA Translation: AAI42997.1
X52359 mRNA Translation: CAA36585.1
CCDSiCCDS46044.1 [P17039-2]
CCDS46045.1 [P17039-1]
PIRiI37968
RefSeqiNP_001092907.1, NM_001099437.1 [P17039-2]
NP_001092908.1, NM_001099438.1 [P17039-2]
NP_919306.2, NM_194325.2 [P17039-1]
XP_011525745.1, XM_011527443.2 [P17039-2]
XP_011525746.1, XM_011527444.1 [P17039-2]
XP_016882912.1, XM_017027423.1 [P17039-2]
XP_016882913.1, XM_017027424.1 [P17039-2]
XP_016882914.1, XM_017027425.1 [P17039-1]
XP_016882915.1, XM_017027426.1 [P17039-1]
XP_016882916.1, XM_017027427.1
XP_016882917.1, XM_017027428.1
XP_016882918.1, XM_017027429.1

3D structure databases

SMRiP17039
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi124660, 2 interactors
IntActiP17039, 1 interactor
STRINGi9606.ENSP00000403441

PTM databases

iPTMnetiP17039
PhosphoSitePlusiP17039

Polymorphism and mutation databases

BioMutaiZNF30
DMDMi332278252

Proteomic databases

jPOSTiP17039
MaxQBiP17039
PaxDbiP17039
PeptideAtlasiP17039
PRIDEiP17039
ProteomicsDBi53442
53443 [P17039-2]
53444 [P17039-3]

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000303586; ENSP00000303889; ENSG00000168661 [P17039-2]
ENST00000439785; ENSP00000403441; ENSG00000168661 [P17039-2]
ENST00000601142; ENSP00000469954; ENSG00000168661 [P17039-1]
ENST00000601957; ENSP00000470094; ENSG00000168661 [P17039-3]
GeneIDi90075
KEGGihsa:90075
UCSCiuc010edp.2 human [P17039-1]

Organism-specific databases

Comparative Toxicogenomics Database

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CTDi
90075

GeneCards: human genes, protein and diseases

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GeneCardsi
ZNF30
HGNCiHGNC:13090 ZNF30
HPAiHPA030400
neXtProtiNX_P17039
OpenTargetsiENSG00000168661
PharmGKBiPA37665

GenAtlas: human gene database

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GenAtlasi
Search...

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00940000164353
HOGENOMiHOG000234617
InParanoidiP17039
KOiK09228
OMAiFVKHGRI
OrthoDBi1318335at2759
TreeFamiTF341817

Enzyme and pathway databases

ReactomeiR-HSA-212436 Generic Transcription Pathway

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

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ChiTaRSi
ZNF30 human

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

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GenomeRNAii
90075

Protein Ontology

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PROi
PR:P17039

Gene expression databases

BgeeiENSG00000168661 Expressed in 167 organ(s), highest expression level in amniotic fluid
ExpressionAtlasiP17039 baseline and differential
GenevisibleiP17039 HS

Family and domain databases

CDDicd07765 KRAB_A-box, 1 hit
InterProiView protein in InterPro
IPR001909 KRAB
IPR036051 KRAB_dom_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF01352 KRAB, 1 hit
PF00096 zf-C2H2, 14 hits
SMARTiView protein in SMART
SM00349 KRAB, 1 hit
SM00355 ZnF_C2H2, 17 hits
SUPFAMiSSF109640 SSF109640, 1 hit
SSF57667 SSF57667, 10 hits
PROSITEiView protein in PROSITE
PS50805 KRAB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 16 hits
PS50157 ZINC_FINGER_C2H2_2, 18 hits

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiZNF30_HUMAN
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P17039
Secondary accession number(s): A5PLP1
, A8K320, B4DIC0, Q6N068
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 1, 1990
Last sequence update: May 3, 2011
Last modified: May 8, 2019
This is version 182 of the entry and version 5 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 19
    Human chromosome 19: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families
  3. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  4. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
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