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Protein

Transposon TX1 uncharacterized 149 kDa protein

Gene
N/A
Organism
Xenopus laevis (African clawed frog)
Status
Reviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Transposon TX1 uncharacterized 149 kDa protein
Alternative name(s):
ORF 2
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiXenopus laevis (African clawed frog)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri8355 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000665371 – 1308Transposon TX1 uncharacterized 149 kDa proteinAdd BLAST1308

Proteomic databases

PRoteomics IDEntifications database

More...
PRIDEi
P14381

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

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ProteinModelPortali
P14381

Database of comparative protein structure models

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ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini494 – 765Reverse transcriptasePROSITE-ProRule annotationAdd BLAST272

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

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Gene3Di
3.60.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR036691 Endo/exonu/phosph_ase_sf
IPR005135 Endo/exonuclease/phosphatase
IPR000477 RT_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF03372 Exo_endo_phos, 1 hit
PF00078 RVT_1, 1 hit

Superfamily database of structural and functional annotation

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SUPFAMi
SSF56219 SSF56219, 1 hit

PROSITE; a protein domain and family database

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PROSITEi
View protein in PROSITE
PS50878 RT_POL, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

P14381-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MALSISTLNT NGCRNPFRMF QVLSFLRQGG YSVSFLQETH TTPELEASWN
60 70 80 90 100
LEWKGRVFFN HLTWTSCGVV TLFSDSFQPE VLSATSVIPG RLLHLRVRES
110 120 130 140 150
GRTYNLMNVY APTTGPERAR FFESLSAYME TIDSDEALII GGDFNYTLDA
160 170 180 190 200
RDRNVPKKRD SSESVLRELI AHFSLVDVWR EQNPETVAFT YVRVRDGHVS
210 220 230 240 250
QSRIDRIYIS SHLMSRAQSS TIRLAPFSDH NCVSLRMSIA PSLPKAAYWH
260 270 280 290 300
FNNSLLEDEG FAKSVRDTWR GWRAFQDEFA TLNQWWDVGK VHLKLLCQEY
310 320 330 340 350
TKSVSGQRNA EIEALNGEVL DLEQRLSGSE DQALQCEYLE RKEALRNMEQ
360 370 380 390 400
RQARGAFVRS RMQLLCDMDR GSRFFYALEK KKGNRKQITC LFAEDGTPLE
410 420 430 440 450
DPEAIRDRAR SFYQNLFSPD PISPDACEEL WDGLPVVSER RKERLETPIT
460 470 480 490 500
LDELSQALRL MPHNKSPGLD GLTIEFFQFF WDTLGPDFHR VLTEAFKKGE
510 520 530 540 550
LPLSCRRAVL SLLPKKGDLR LIKNWRPVSL LSTDYKIVAK AISLRLKSVL
560 570 580 590 600
AEVIHPDQSY TVPGRTIFDN VFLIRDLLHF ARRTGLSLAF LSLDQEKAFD
610 620 630 640 650
RVDHQYLIGT LQAYSFGPQF VGYLKTMYAS AECLVKINWS LTAPLAFGRG
660 670 680 690 700
VRQGCPLSGQ LYSLAIEPFL CLLRKRLTGL VLKEPDMRVV LSAYADDVIL
710 720 730 740 750
VAQDLVDLER AQECQEVYAA ASSARINWSK SSGLLEGSLK VDFLPPAFRD
760 770 780 790 800
ISWESKIIKY LGVYLSAEEY PVSQNFIELE ECVLTRLGKW KGFAKVLSMR
810 820 830 840 850
GRALVINQLV ASQIWYRLIC LSPTQEFIAK IQRRLLDFLW IGKHWVSAGV
860 870 880 890 900
SSLPLKEGGQ GVVCIRSQVH TFRLQQIQRY LYADPSPQWC TLASSFYRQV
910 920 930 940 950
RNMGYDRQLF IIEPEGFLRN LSTLPAYYQD TLKTWSMVSV LRQGATEGED
960 970 980 990 1000
ILNEPLLYNP SFKTRMLESI SIRRRLCQAQ LTRVGDLLDF EKSDWVDSQA
1010 1020 1030 1040 1050
VMQRMGFLTT RVPHRLLKEI KDTISPDSHT FIDGVLHAGE PRPPWNSSPP
1060 1070 1080 1090 1100
DIIIAPKTRQ SPQAPPSPNL SQLENFPLTR FHDITRKLLY SLMLHTVHFL
1110 1120 1130 1140 1150
ALISRYDTIW RRVLNEGERP QWRAFYSSLV PRPTGDLSWK VLHGALSTGE
1160 1170 1180 1190 1200
YLARFTDSPA ACPFCGKGES VFHAYFTCAR LQPLLALLRK LYLQFWLHFS
1210 1220 1230 1240 1250
PHVYIFGRPV SRDNKEKDLL SNLLLALAKL VIHKSRKQCL EGGNPLPAEV
1260 1270 1280 1290 1300
LFRVLVRSRI RAEYTQAVFT GRLKEFADQW AIDGVLCSVS PDLVSVQTIL

TLPYLSAL
Length:1,308
Mass (Da):149,578
Last modified:January 1, 1990 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC9A9C98CDC169C19
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
M26915 Genomic DNA Translation: AAA49976.1

Protein sequence database of the Protein Information Resource

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PIRi
B32494

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M26915 Genomic DNA Translation: AAA49976.1
PIRiB32494

3D structure databases

ProteinModelPortaliP14381
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiP14381

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.60.10.10, 1 hit
InterProiView protein in InterPro
IPR036691 Endo/exonu/phosph_ase_sf
IPR005135 Endo/exonuclease/phosphatase
IPR000477 RT_dom
PfamiView protein in Pfam
PF03372 Exo_endo_phos, 1 hit
PF00078 RVT_1, 1 hit
SUPFAMiSSF56219 SSF56219, 1 hit
PROSITEiView protein in PROSITE
PS50878 RT_POL, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiYTX2_XENLA
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: P14381
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 1, 1990
Last sequence update: January 1, 1990
Last modified: May 23, 2018
This is version 62 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Transposable element
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