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Protein

50S ribosomal protein L30

Gene

rpl30

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

This is one of 5 proteins that mediate the attachment of the 5S rRNA onto the large ribosomal subunit, stabilizing the orientation of adjacent RNA domains.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L30UniRule annotation
Alternative name(s):
Hl16
Hl20
Hmal30
Gene namesi
Name:rpl30UniRule annotation
Ordered Locus Names:rrnAC1591
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHaloarculaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001046221 – 15450S ribosomal protein L30Add BLAST154

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Binds 5S rRNA.UniRule annotation2 Publications

Protein-protein interaction databases

STRINGi272569.rrnAC1591

Structurei

Secondary structure

1154
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi2 – 6Combined sources5
Helixi15 – 23Combined sources9
Beta strandi31 – 35Combined sources5
Helixi39 – 47Combined sources9
Helixi49 – 51Combined sources3
Beta strandi52 – 55Combined sources4
Helixi59 – 69Combined sources11
Beta strandi72 – 75Combined sources4
Helixi81 – 87Combined sources7
Beta strandi88 – 92Combined sources5
Helixi93 – 101Combined sources9
Helixi108 – 110Combined sources3
Beta strandi114 – 117Combined sources4
Beta strandi128 – 131Combined sources4
Helixi132 – 134Combined sources3
Beta strandi137 – 140Combined sources4
Helixi143 – 152Combined sources10

3D structure databases

ProteinModelPortaliP14121
SMRiP14121
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP14121

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL30 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04086 Archaea
COG1841 LUCA
HOGENOMiHOG000170918
KOiK02907
OMAiKDYITWG
OrthoDBiPOG093Z0DUC

Family and domain databases

CDDicd01657 Ribosomal_L7_archeal_euk, 1 hit
Gene3Di1.10.15.30, 1 hit
3.30.1390.20, 1 hit
HAMAPiMF_01371_A Ribosomal_L30_A, 1 hit
InterProiView protein in InterPro
IPR036919 L30_ferredoxin-like_sf
IPR005997 Ribosomal_L30_arc
IPR023106 Ribosomal_L30_central_dom_arc
IPR018038 Ribosomal_L30_CS
IPR016082 Ribosomal_L30_ferredoxin-like
IPR035808 Ribosomal_L7_euk_arc
PfamiView protein in Pfam
PF00327 Ribosomal_L30, 1 hit
SUPFAMiSSF55129 SSF55129, 1 hit
TIGRFAMsiTIGR01309 uL30_arch, 1 hit
PROSITEiView protein in PROSITE
PS00634 RIBOSOMAL_L30, 1 hit

Sequencei

Sequence statusi: Complete.

P14121-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHALVQLRGE VNMHTDIQDT LEMLNIHHVN HCTLVPETDA YRGMVAKVND
60 70 80 90 100
FVAFGEPSQE TLETVLATRA EPLEGDADVD DEWVAEHTDY DDISGLAFAL
110 120 130 140 150
LSEETTLREQ GLSPTLRLHP PRGGHDGVKH PVKEGGQLGK HDTEGIDDLL

EAMR
Length:154
Mass (Da):17,042
Last modified:August 1, 1992 - v2
Checksum:iED673F036E974C14
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti83W → L AA sequence (PubMed:2591382).Curated1
Sequence conflicti148Missing AA sequence (PubMed:2591382).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X58395 Genomic DNA Translation: CAA41292.1
AY596297 Genomic DNA Translation: AAV46509.1
PIRiS16543 R5HS30
RefSeqiWP_004957369.1, NC_006396.1

Genome annotation databases

EnsemblBacteriaiAAV46509; AAV46509; rrnAC1591
GeneIDi3127531
KEGGihma:rrnAC1591
PATRICifig|272569.17.peg.2280

Similar proteinsi

Entry informationi

Entry nameiRL30_HALMA
AccessioniPrimary (citable) accession number: P14121
Secondary accession number(s): Q5V1U3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 1, 1990
Last sequence update: August 1, 1992
Last modified: March 28, 2018
This is version 132 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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