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Protein

50S ribosomal protein L24e

Gene

rpl24e

Organism
Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Binds to the 23S rRNA.

Cofactori

Zn2+CuratedNote: Binds 1 zinc ion per subunit.Curated

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi7ZincCurated1
Metal bindingi10ZincCurated1
Metal bindingi33ZincCurated1
Metal bindingi37ZincCurated1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri7 – 37C4-typeCuratedAdd BLAST31

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L24e
Alternative name(s):
Hl21/Hl22
Gene namesi
Name:rpl24e
Ordered Locus Names:rrnAC0104
OrganismiHaloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui)
Taxonomic identifieri272569 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaHalobacterialesHaloarculaceaeHaloarcula
Proteomesi
  • UP000001169 Componenti: Chromosome I

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001369132 – 6750S ribosomal protein L24eAdd BLAST66

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Forms a cluster with proteins L3 and L14.2 Publications

Protein-protein interaction databases

STRINGi272569.rrnAC0104

Structurei

Secondary structure

167
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Turni8 – 10Combined sources3
Beta strandi20 – 23Combined sources4
Beta strandi25 – 27Combined sources3
Beta strandi29 – 33Combined sources5
Helixi35 – 42Combined sources8
Helixi47 – 49Combined sources3
Beta strandi50 – 53Combined sources4
Turni54 – 56Combined sources3

3D structure databases

ProteinModelPortaliP14116
SMRiP14116
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP14116

Family & Domainsi

Sequence similaritiesi

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri7 – 37C4-typeCuratedAdd BLAST31

Keywords - Domaini

Zinc-finger

Phylogenomic databases

eggNOGiarCOG01950 Archaea
COG2075 LUCA
HOGENOMiHOG000156057
KOiK02896
OrthoDBiPOG093Z0INN

Family and domain databases

CDDicd00472 Ribosomal_L24e_L24, 1 hit
Gene3Di2.30.170.20, 1 hit
HAMAPiMF_00773 Ribosomal_L24e, 1 hit
InterProiView protein in InterPro
IPR038630 L24e/L24_sf
IPR023438 Ribosomal_L24e
IPR000988 Ribosomal_L24e-rel
IPR023442 Ribosomal_L24e_CS
IPR011017 TRASH_dom
PANTHERiPTHR10792 PTHR10792, 1 hit
PfamiView protein in Pfam
PF01246 Ribosomal_L24e, 1 hit
SMARTiView protein in SMART
SM00746 TRASH, 1 hit
PROSITEiView protein in PROSITE
PS01073 RIBOSOMAL_L24E, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P14116-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRTRECDYC GTDIEPGTGT MFVHKDGATT HFCSSKCENN ADLGREARNL
60
EWTDTARGEA GEAEDEA
Length:67
Mass (Da):7,356
Last modified:January 23, 2007 - v2
Checksum:iD4FCAE00935B7305
GO

Sequence cautioni

The sequence AAV45180 differs from that shown. Reason: Frameshift at position 67.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY596297 Genomic DNA Translation: AAV45180.1 Frameshift.
PIRiS06846 R6HS21

Genome annotation databases

EnsemblBacteriaiAAV45180; AAV45180; rrnAC0104
KEGGihma:rrnAC0104
PATRICifig|272569.17.peg.909

Similar proteinsi

Entry informationi

Entry nameiRL24E_HALMA
AccessioniPrimary (citable) accession number: P14116
Secondary accession number(s): Q5V5M2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 1, 1990
Last sequence update: January 23, 2007
Last modified: April 25, 2018
This is version 139 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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