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Protein

40S ribosomal protein S26

Gene

RpS26

Organism
Drosophila melanogaster (Fruit fly)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • mRNA binding Source: GO_Central
  • structural constituent of ribosome Source: FlyBase

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-DME-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-DME-1799339 SRP-dependent cotranslational protein targeting to membrane
R-DME-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-DME-72649 Translation initiation complex formation
R-DME-72689 Formation of a pool of free 40S subunits
R-DME-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-DME-72702 Ribosomal scanning and start codon recognition
R-DME-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-DME-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-DME-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S26
Short name:
DS31
Gene namesi
Name:RpS26
ORF Names:CG10305
OrganismiDrosophila melanogaster (Fruit fly)
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000000803 Componenti: Chromosome 2L

Organism-specific databases

FlyBaseiFBgn0261597 RpS26

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Endoplasmic reticulum

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002045201 – 11440S ribosomal protein S26Add BLAST114

Proteomic databases

PaxDbiP13008
PRIDEiP13008

Expressioni

Gene expression databases

BgeeiFBgn0261597
ExpressionAtlasiP13008 baseline and differential
GenevisibleiP13008 DM

Interactioni

Subunit structurei

Component of the 40S small ribosomal subunit.1 Publication

Binary interactionsi

WithEntry#Exp.IntActNotes
Dmel\CG14543Q9VBI04EBI-171405,EBI-170896

Protein-protein interaction databases

BioGridi61093, 40 interactors
DIPiDIP-17487N
IntActiP13008, 39 interactors
STRINGi7227.FBpp0080641

Structurei

3D structure databases

ProteinModelPortaliP13008
SMRiP13008
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1768 Eukaryota
COG4830 LUCA
GeneTreeiENSGT00390000002517
InParanoidiP13008
KOiK02976
OMAiDKAICVT
OrthoDBiEOG091G19WY
PhylomeDBiP13008

Family and domain databases

Gene3Di3.30.1740.20, 1 hit
InterProiView protein in InterPro
IPR000892 Ribosomal_S26e
IPR038551 Ribosomal_S26e_sf
PANTHERiPTHR12538 PTHR12538, 1 hit
PfamiView protein in Pfam
PF01283 Ribosomal_S26e, 1 hit
PROSITEiView protein in PROSITE
PS00733 RIBOSOMAL_S26E, 1 hit

Sequencei

Sequence statusi: Complete.

P13008-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKKRRNGGR NKHNRGHVKP VRCTNCARCV PKDKAIKKFV IRNIVEAAAV
60 70 80 90 100
RDITEASIWD SYVLPKLYAK LHYCVSCAIH SKVVRNRSRE ARRIRTPPLR
110
SFPKDMARNN QNRK
Length:114
Mass (Da):13,267
Last modified:January 1, 1990 - v1
Checksum:i0F0A6D8A8C6A8D7F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X13625 mRNA Translation: CAB38441.1
X14247 Genomic DNA Translation: CAA32463.1
AE014134 Genomic DNA Translation: AAN11004.1
AE014134 Genomic DNA Translation: AAN11005.1
AY069761 mRNA Translation: AAL39906.1
BT072894 mRNA Translation: ACN71213.1
PIRiS03724 R3FF26
RefSeqiNP_001260537.1, NM_001273608.1
NP_001286042.1, NM_001299113.1
NP_523595.1, NM_078871.6
NP_724109.1, NM_165252.2
NP_724110.1, NM_165253.2
UniGeneiDm.6957

Genome annotation databases

EnsemblMetazoaiFBtr0081089; FBpp0080639; FBgn0261597
FBtr0081090; FBpp0080640; FBgn0261597
FBtr0081091; FBpp0080641; FBgn0261597
FBtr0331455; FBpp0303872; FBgn0261597
FBtr0346591; FBpp0312181; FBgn0261597
GeneIDi35098
KEGGidme:Dmel_CG10305

Similar proteinsi

Entry informationi

Entry nameiRS26_DROME
AccessioniPrimary (citable) accession number: P13008
Secondary accession number(s): A4V0T7
, C0PV38, P10380, Q0E8P4, Q9VJ88
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 1, 1990
Last sequence update: January 1, 1990
Last modified: July 18, 2018
This is version 149 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Drosophila
    Drosophila: entries, gene names and cross-references to FlyBase
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. Ribosomal proteins
    Ribosomal proteins families and list of entries
  4. SIMILARITY comments
    Index of protein domains and families

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